Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 MIR4674-201ENST00000582457 87 ntBASIC18.81■□□□□ 0.6
IRX4P78413 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
IRX4P78413 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
IRX4P78413 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.81■□□□□ 0.6
IRX4P78413 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX4P78413 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX4P78413 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX4P78413 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX4P78413 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.81■□□□□ 0.6
IRX4P78413 NOC2LP1-202ENST00000452600 2235 ntBASIC18.81■□□□□ 0.6
IRX4P78413 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
IRX4P78413 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX4P78413 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
IRX4P78413 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.81■□□□□ 0.6
IRX4P78413 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.81■□□□□ 0.6
IRX4P78413 AC016734.2-201ENST00000624325 1377 ntBASIC18.81■□□□□ 0.6
IRX4P78413 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
IRX4P78413 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
IRX4P78413 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.8■□□□□ 0.6
IRX4P78413 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IRX4P78413 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
IRX4P78413 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX4P78413 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.8■□□□□ 0.6
IRX4P78413 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IRX4P78413 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX4P78413 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX4P78413 RASA4DP-201ENST00000460726 1199 ntBASIC18.8■□□□□ 0.6
IRX4P78413 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.8■□□□□ 0.6
IRX4P78413 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX4P78413 AC011498.5-201ENST00000592027 486 ntBASIC18.8■□□□□ 0.6
IRX4P78413 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX4P78413 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX4P78413 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX4P78413 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.8■□□□□ 0.6
IRX4P78413 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX4P78413 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.8■□□□□ 0.6
IRX4P78413 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
IRX4P78413 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IRX4P78413 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX4P78413 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
IRX4P78413 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IRX4P78413 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
IRX4P78413 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IRX4P78413 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
IRX4P78413 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.79■□□□□ 0.6
IRX4P78413 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.79■□□□□ 0.6
IRX4P78413 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
IRX4P78413 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.79■□□□□ 0.6
IRX4P78413 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.79■□□□□ 0.6
IRX4P78413 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.79■□□□□ 0.6
IRX4P78413 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IRX4P78413 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
IRX4P78413 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.79■□□□□ 0.6
IRX4P78413 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
IRX4P78413 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.79■□□□□ 0.6
IRX4P78413 FAAHP1-202ENST00000446499 1238 ntBASIC18.79■□□□□ 0.6
IRX4P78413 BX276092.5-203ENST00000456199 560 ntBASIC18.79■□□□□ 0.6
IRX4P78413 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.79■□□□□ 0.6
IRX4P78413 MIR3180-1-201ENST00000580374 94 ntBASIC18.79■□□□□ 0.6
IRX4P78413 MIR3180-3-201ENST00000584616 94 ntBASIC18.79■□□□□ 0.6
IRX4P78413 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.79■□□□□ 0.6
IRX4P78413 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IRX4P78413 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IRX4P78413 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
IRX4P78413 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
IRX4P78413 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IRX4P78413 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IRX4P78413 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
IRX4P78413 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IRX4P78413 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.79■□□□□ 0.6
IRX4P78413 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.79■□□□□ 0.6
IRX4P78413 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IRX4P78413 AC068880.1-201ENST00000507289 2297 ntBASIC18.79■□□□□ 0.6
IRX4P78413 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX4P78413 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX4P78413 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.78■□□□□ 0.6
IRX4P78413 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
IRX4P78413 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.78■□□□□ 0.6
IRX4P78413 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX4P78413 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.78■□□□□ 0.6
IRX4P78413 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.78■□□□□ 0.6
IRX4P78413 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
IRX4P78413 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX4P78413 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX4P78413 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX4P78413 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
IRX4P78413 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IRX4P78413 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
IRX4P78413 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
IRX4P78413 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.78■□□□□ 0.6
IRX4P78413 AL121672.3-201ENST00000608644 468 ntBASIC18.78■□□□□ 0.6
IRX4P78413 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.78■□□□□ 0.6
IRX4P78413 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.78■□□□□ 0.6
IRX4P78413 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.78■□□□□ 0.6
IRX4P78413 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.78■□□□□ 0.6
IRX4P78413 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.78■□□□□ 0.6
IRX4P78413 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX4P78413 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX4P78413 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX4P78413 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms