Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LMO4P61968 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LMO4P61968 AC243591.1-201ENST00000452967 1364 ntBASIC14.78□□□□□ -0.04
LMO4P61968 KRT8P47-201ENST00000604727 1398 ntBASIC14.78□□□□□ -0.04
LMO4P61968 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LMO4P61968 AC022898.2-201ENST00000616822 1312 ntBASIC14.78□□□□□ -0.04
LMO4P61968 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LMO4P61968 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LMO4P61968 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LMO4P61968 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LMO4P61968 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LMO4P61968 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
LMO4P61968 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.78□□□□□ -0.04
LMO4P61968 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.78□□□□□ -0.04
LMO4P61968 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.78□□□□□ -0.04
LMO4P61968 AC139887.3-201ENST00000568585 713 ntBASIC14.78□□□□□ -0.04
LMO4P61968 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.78□□□□□ -0.04
LMO4P61968 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.78□□□□□ -0.04
LMO4P61968 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LMO4P61968 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
LMO4P61968 AL671883.3-201ENST00000603274 991 ntBASIC14.78□□□□□ -0.04
LMO4P61968 MIR7706-201ENST00000613747 67 ntBASIC14.78□□□□□ -0.04
LMO4P61968 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.78□□□□□ -0.04
LMO4P61968 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LMO4P61968 AP000867.4-201ENST00000641616 219 ntBASIC14.78□□□□□ -0.04
LMO4P61968 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LMO4P61968 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.78□□□□□ -0.04
LMO4P61968 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LMO4P61968 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LMO4P61968 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.78□□□□□ -0.04
LMO4P61968 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.78□□□□□ -0.04
LMO4P61968 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LMO4P61968 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LMO4P61968 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LMO4P61968 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LMO4P61968 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LMO4P61968 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
LMO4P61968 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LMO4P61968 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.77□□□□□ -0.04
LMO4P61968 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.77□□□□□ -0.04
LMO4P61968 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LMO4P61968 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LMO4P61968 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.77□□□□□ -0.04
LMO4P61968 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
LMO4P61968 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.04
LMO4P61968 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.77□□□□□ -0.04
LMO4P61968 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
LMO4P61968 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.04
LMO4P61968 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LMO4P61968 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LMO4P61968 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
LMO4P61968 RPS2P28-201ENST00000314255 741 ntBASIC14.77□□□□□ -0.05
LMO4P61968 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.77□□□□□ -0.05
LMO4P61968 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LMO4P61968 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LMO4P61968 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.77□□□□□ -0.05
LMO4P61968 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LMO4P61968 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.77□□□□□ -0.05
LMO4P61968 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.77□□□□□ -0.05
LMO4P61968 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.77□□□□□ -0.05
LMO4P61968 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.77□□□□□ -0.05
LMO4P61968 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
LMO4P61968 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.77□□□□□ -0.05
LMO4P61968 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.77□□□□□ -0.05
LMO4P61968 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
LMO4P61968 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.77□□□□□ -0.05
LMO4P61968 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.77□□□□□ -0.05
LMO4P61968 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LMO4P61968 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LMO4P61968 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.77□□□□□ -0.05
LMO4P61968 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LMO4P61968 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LMO4P61968 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LMO4P61968 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LMO4P61968 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.77□□□□□ -0.05
LMO4P61968 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LMO4P61968 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LMO4P61968 AC010460.3-201ENST00000511359 1579 ntBASIC14.77□□□□□ -0.05
LMO4P61968 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.76□□□□□ -0.05
LMO4P61968 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
LMO4P61968 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
LMO4P61968 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LMO4P61968 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LMO4P61968 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LMO4P61968 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LMO4P61968 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LMO4P61968 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LMO4P61968 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LMO4P61968 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LMO4P61968 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LMO4P61968 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.76□□□□□ -0.05
LMO4P61968 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.76□□□□□ -0.05
LMO4P61968 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
LMO4P61968 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
LMO4P61968 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LMO4P61968 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.76□□□□□ -0.05
LMO4P61968 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.76□□□□□ -0.05
LMO4P61968 AC122714.2-201ENST00000502787 707 ntBASIC14.76□□□□□ -0.05
LMO4P61968 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.76□□□□□ -0.05
LMO4P61968 SLC25A1P1-201ENST00000528351 927 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms