Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 DRAXINP1-201ENST00000437611 948 ntBASIC20.64■□□□□ 0.89
CHMP4BP1P59074 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 AL121772.3-201ENST00000610840 674 ntBASIC20.64■□□□□ 0.89
CHMP4BP1P59074 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CHMP4BP1P59074 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 PVRIG2P-201ENST00000435460 978 ntBASIC20.63■□□□□ 0.89
CHMP4BP1P59074 FDX1P1-201ENST00000449115 551 ntBASIC20.63■□□□□ 0.89
CHMP4BP1P59074 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 AC124864.1-201ENST00000623408 392 ntBASIC20.63■□□□□ 0.89
CHMP4BP1P59074 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CHMP4BP1P59074 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 AC009078.2-202ENST00000463353 338 ntBASIC20.62■□□□□ 0.89
CHMP4BP1P59074 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 AC012615.1-201ENST00000565797 1299 ntBASIC20.62■□□□□ 0.89
CHMP4BP1P59074 AC090616.6-201ENST00000582640 721 ntBASIC20.62■□□□□ 0.89
CHMP4BP1P59074 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 AC099336.1-202ENST00000602961 463 ntBASIC20.62■□□□□ 0.89
CHMP4BP1P59074 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP4BP1P59074 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP4BP1P59074 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.61■□□□□ 0.89
CHMP4BP1P59074 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP4BP1P59074 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CHMP4BP1P59074 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP4BP1P59074 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP4BP1P59074 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP4BP1P59074 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP4BP1P59074 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.61■□□□□ 0.89
CHMP4BP1P59074 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms