Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
SUMO3P55854 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.35■□□□□ 0.21
SUMO3P55854 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SUMO3P55854 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SUMO3P55854 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SUMO3P55854 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.35■□□□□ 0.21
SUMO3P55854 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SUMO3P55854 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SUMO3P55854 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.35■□□□□ 0.21
SUMO3P55854 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.35■□□□□ 0.21
SUMO3P55854 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.35■□□□□ 0.21
SUMO3P55854 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
SUMO3P55854 BX276092.5-203ENST00000456199 560 ntBASIC16.35■□□□□ 0.21
SUMO3P55854 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.35■□□□□ 0.21
SUMO3P55854 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.35■□□□□ 0.21
SUMO3P55854 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.35■□□□□ 0.21
SUMO3P55854 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SUMO3P55854 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.35■□□□□ 0.21
SUMO3P55854 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
SUMO3P55854 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.35■□□□□ 0.21
SUMO3P55854 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SUMO3P55854 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SUMO3P55854 AC091076.1-201ENST00000610741 619 ntBASIC16.35■□□□□ 0.21
SUMO3P55854 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SUMO3P55854 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.35■□□□□ 0.21
SUMO3P55854 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SUMO3P55854 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SUMO3P55854 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SUMO3P55854 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SUMO3P55854 IER3-202ENST00000376377 1350 ntBASIC16.35■□□□□ 0.21
SUMO3P55854 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SUMO3P55854 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SUMO3P55854 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SUMO3P55854 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.35■□□□□ 0.21
SUMO3P55854 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SUMO3P55854 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.35■□□□□ 0.21
SUMO3P55854 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SUMO3P55854 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.34■□□□□ 0.21
SUMO3P55854 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SUMO3P55854 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SUMO3P55854 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SUMO3P55854 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.34■□□□□ 0.21
SUMO3P55854 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SUMO3P55854 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.34■□□□□ 0.21
SUMO3P55854 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.34■□□□□ 0.21
SUMO3P55854 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SUMO3P55854 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SUMO3P55854 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SUMO3P55854 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SUMO3P55854 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SUMO3P55854 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SUMO3P55854 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SUMO3P55854 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SUMO3P55854 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.34■□□□□ 0.21
SUMO3P55854 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.34■□□□□ 0.21
SUMO3P55854 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.34■□□□□ 0.21
SUMO3P55854 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.34■□□□□ 0.21
SUMO3P55854 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SUMO3P55854 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SUMO3P55854 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SUMO3P55854 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.34■□□□□ 0.21
SUMO3P55854 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SUMO3P55854 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.34■□□□□ 0.21
SUMO3P55854 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SUMO3P55854 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SUMO3P55854 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SUMO3P55854 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SUMO3P55854 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SUMO3P55854 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SUMO3P55854 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.34■□□□□ 0.21
SUMO3P55854 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.33■□□□□ 0.21
SUMO3P55854 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SUMO3P55854 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SUMO3P55854 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.33■□□□□ 0.21
SUMO3P55854 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.33■□□□□ 0.21
SUMO3P55854 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SUMO3P55854 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
SUMO3P55854 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SUMO3P55854 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SUMO3P55854 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.33■□□□□ 0.21
SUMO3P55854 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SUMO3P55854 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SUMO3P55854 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SUMO3P55854 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SUMO3P55854 AC090340.1-201ENST00000620778 4980 ntBASIC16.33■□□□□ 0.2
SUMO3P55854 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SUMO3P55854 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SUMO3P55854 ARMC10P1-201ENST00000313754 855 ntBASIC16.33■□□□□ 0.2
SUMO3P55854 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SUMO3P55854 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SUMO3P55854 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SUMO3P55854 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.33■□□□□ 0.2
SUMO3P55854 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SUMO3P55854 MTCL1P1-201ENST00000446207 792 ntBASIC16.33■□□□□ 0.2
SUMO3P55854 AC068472.1-201ENST00000474589 881 ntBASIC16.33■□□□□ 0.2
SUMO3P55854 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SUMO3P55854 AC112698.1-201ENST00000510299 916 ntBASIC16.33■□□□□ 0.2
SUMO3P55854 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.33■□□□□ 0.2
SUMO3P55854 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SUMO3P55854 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms