Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PSMD4P55036 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PSMD4P55036 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.83■□□□□ 0.29
PSMD4P55036 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
PSMD4P55036 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PSMD4P55036 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.29
PSMD4P55036 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
PSMD4P55036 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.83■□□□□ 0.29
PSMD4P55036 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PSMD4P55036 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.83■□□□□ 0.28
PSMD4P55036 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PSMD4P55036 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
PSMD4P55036 FLJ13224-201ENST00000313737 1514 ntBASIC16.83■□□□□ 0.28
PSMD4P55036 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.83■□□□□ 0.28
PSMD4P55036 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PSMD4P55036 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PSMD4P55036 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PSMD4P55036 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PSMD4P55036 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PSMD4P55036 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PSMD4P55036 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PSMD4P55036 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.83■□□□□ 0.28
PSMD4P55036 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.83■□□□□ 0.28
PSMD4P55036 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PSMD4P55036 SLC25A6P5-201ENST00000435663 894 ntBASIC16.83■□□□□ 0.28
PSMD4P55036 AC104076.2-201ENST00000448912 469 ntBASIC16.83■□□□□ 0.28
PSMD4P55036 DUX4L26-201ENST00000489078 1255 ntBASIC16.83■□□□□ 0.28
PSMD4P55036 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PSMD4P55036 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PSMD4P55036 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PSMD4P55036 KRT18P21-201ENST00000515767 1272 ntBASIC16.83■□□□□ 0.28
PSMD4P55036 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PSMD4P55036 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.83■□□□□ 0.28
PSMD4P55036 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
PSMD4P55036 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PSMD4P55036 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.83■□□□□ 0.28
PSMD4P55036 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.83■□□□□ 0.28
PSMD4P55036 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PSMD4P55036 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PSMD4P55036 NFIC-211ENST00000641145 8399 ntBASIC16.83■□□□□ 0.28
PSMD4P55036 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.83■□□□□ 0.28
PSMD4P55036 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PSMD4P55036 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PSMD4P55036 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PSMD4P55036 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 AL391807.1-203ENST00000604392 2365 ntBASIC16.82■□□□□ 0.28
PSMD4P55036 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.82■□□□□ 0.28
PSMD4P55036 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.82■□□□□ 0.28
PSMD4P55036 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.82■□□□□ 0.28
PSMD4P55036 AL024508.2-201ENST00000607749 1894 ntBASIC16.82■□□□□ 0.28
PSMD4P55036 PHGDH-209ENST00000641074 1780 ntBASIC16.82■□□□□ 0.28
PSMD4P55036 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.82■□□□□ 0.28
PSMD4P55036 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 KRT89P-201ENST00000620027 1478 ntBASIC16.82■□□□□ 0.28
PSMD4P55036 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.82■□□□□ 0.28
PSMD4P55036 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PSMD4P55036 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.82■□□□□ 0.28
PSMD4P55036 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.82■□□□□ 0.28
PSMD4P55036 SPDYE15P-201ENST00000424157 909 ntBASIC16.82■□□□□ 0.28
PSMD4P55036 FAM210CP-201ENST00000445714 574 ntBASIC16.82■□□□□ 0.28
PSMD4P55036 AL359075.1-203ENST00000462729 1002 ntBASIC16.82■□□□□ 0.28
PSMD4P55036 AC022616.7-201ENST00000525383 220 ntBASIC16.82■□□□□ 0.28
PSMD4P55036 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.82■□□□□ 0.28
PSMD4P55036 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.82■□□□□ 0.28
PSMD4P55036 AC024563.2-201ENST00000603282 481 ntBASIC16.82■□□□□ 0.28
PSMD4P55036 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.82■□□□□ 0.28
PSMD4P55036 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.82■□□□□ 0.28
PSMD4P55036 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.82■□□□□ 0.28
PSMD4P55036 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.82■□□□□ 0.28
PSMD4P55036 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PSMD4P55036 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PSMD4P55036 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSMD4P55036 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.81■□□□□ 0.28
PSMD4P55036 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PSMD4P55036 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSMD4P55036 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSMD4P55036 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.81■□□□□ 0.28
PSMD4P55036 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSMD4P55036 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSMD4P55036 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PSMD4P55036 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms