Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC22.06■■□□□ 1.12
PDE1AP54750 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC22.06■■□□□ 1.12
PDE1AP54750 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
PDE1AP54750 KRT18P65-201ENST00000439811 1286 ntBASIC22.06■■□□□ 1.12
PDE1AP54750 AP003733.1-201ENST00000491725 852 ntBASIC22.06■■□□□ 1.12
PDE1AP54750 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PDE1AP54750 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.06■■□□□ 1.12
PDE1AP54750 ZNF444P1-201ENST00000559497 298 ntBASIC22.06■■□□□ 1.12
PDE1AP54750 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC22.06■■□□□ 1.12
PDE1AP54750 RNF126P1-202ENST00000569893 925 ntBASIC22.06■■□□□ 1.12
PDE1AP54750 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC22.06■■□□□ 1.12
PDE1AP54750 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC22.06■■□□□ 1.12
PDE1AP54750 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC22.06■■□□□ 1.12
PDE1AP54750 WDR6-223ENST00000627177 207 ntTSL 2 BASIC22.06■■□□□ 1.12
PDE1AP54750 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
PDE1AP54750 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC22.06■■□□□ 1.12
PDE1AP54750 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDE1AP54750 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDE1AP54750 LETM1P2-201ENST00000597330 2178 ntBASIC22.06■■□□□ 1.12
PDE1AP54750 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDE1AP54750 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDE1AP54750 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC22.06■■□□□ 1.12
PDE1AP54750 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDE1AP54750 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22.06■■□□□ 1.12
PDE1AP54750 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDE1AP54750 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDE1AP54750 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC22.05■■□□□ 1.12
PDE1AP54750 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC22.05■■□□□ 1.12
PDE1AP54750 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDE1AP54750 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
PDE1AP54750 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC22.05■■□□□ 1.12
PDE1AP54750 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDE1AP54750 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDE1AP54750 SAPCD2P2-201ENST00000431719 1174 ntBASIC22.05■■□□□ 1.12
PDE1AP54750 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PDE1AP54750 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC22.05■■□□□ 1.12
PDE1AP54750 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC22.05■■□□□ 1.12
PDE1AP54750 GXYLT1P4-201ENST00000613576 1192 ntBASIC22.05■■□□□ 1.12
PDE1AP54750 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC22.05■■□□□ 1.12
PDE1AP54750 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC22.05■■□□□ 1.12
PDE1AP54750 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDE1AP54750 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDE1AP54750 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDE1AP54750 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC22.05■■□□□ 1.12
PDE1AP54750 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC22.05■■□□□ 1.12
PDE1AP54750 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC22.05■■□□□ 1.12
PDE1AP54750 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
PDE1AP54750 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC22.04■■□□□ 1.12
PDE1AP54750 LINC00896-202ENST00000609602 2128 ntBASIC22.04■■□□□ 1.12
PDE1AP54750 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDE1AP54750 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDE1AP54750 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC22.04■■□□□ 1.12
PDE1AP54750 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDE1AP54750 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDE1AP54750 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDE1AP54750 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDE1AP54750 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDE1AP54750 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC22.04■■□□□ 1.12
PDE1AP54750 AL671277.2-201ENST00000458060 996 ntBASIC22.04■■□□□ 1.12
PDE1AP54750 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
PDE1AP54750 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDE1AP54750 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDE1AP54750 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC22.04■■□□□ 1.12
PDE1AP54750 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDE1AP54750 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDE1AP54750 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDE1AP54750 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDE1AP54750 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDE1AP54750 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDE1AP54750 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC22.04■■□□□ 1.12
PDE1AP54750 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDE1AP54750 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
PDE1AP54750 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
PDE1AP54750 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC22.04■■□□□ 1.12
PDE1AP54750 AC022898.2-201ENST00000616822 1312 ntBASIC22.04■■□□□ 1.12
PDE1AP54750 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC22.04■■□□□ 1.12
PDE1AP54750 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
PDE1AP54750 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDE1AP54750 AL353692.3-201ENST00000407031 1396 ntBASIC22.03■■□□□ 1.12
PDE1AP54750 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC22.03■■□□□ 1.12
PDE1AP54750 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC22.03■■□□□ 1.12
PDE1AP54750 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC22.03■■□□□ 1.12
PDE1AP54750 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC22.03■■□□□ 1.12
PDE1AP54750 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC22.03■■□□□ 1.12
PDE1AP54750 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC22.03■■□□□ 1.12
PDE1AP54750 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PDE1AP54750 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDE1AP54750 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PDE1AP54750 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC22.03■■□□□ 1.12
PDE1AP54750 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
PDE1AP54750 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC22.02■■□□□ 1.12
PDE1AP54750 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC22.02■■□□□ 1.12
PDE1AP54750 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
PDE1AP54750 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDE1AP54750 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDE1AP54750 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PDE1AP54750 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDE1AP54750 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC22.02■■□□□ 1.12
PDE1AP54750 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PDE1AP54750 AC005332.3-201ENST00000589904 676 ntBASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms