Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.3■□□□□ 0.68
RAD23BP54727 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAD23BP54727 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.3■□□□□ 0.68
RAD23BP54727 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.3■□□□□ 0.68
RAD23BP54727 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.3■□□□□ 0.68
RAD23BP54727 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAD23BP54727 Z83836.1-201ENST00000624605 1642 ntBASIC19.3■□□□□ 0.68
RAD23BP54727 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAD23BP54727 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.3■□□□□ 0.68
RAD23BP54727 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAD23BP54727 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAD23BP54727 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.3■□□□□ 0.68
RAD23BP54727 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAD23BP54727 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.3■□□□□ 0.68
RAD23BP54727 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.3■□□□□ 0.68
RAD23BP54727 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAD23BP54727 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.3■□□□□ 0.68
RAD23BP54727 PCED1CP-201ENST00000419887 785 ntBASIC19.3■□□□□ 0.68
RAD23BP54727 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.3■□□□□ 0.68
RAD23BP54727 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAD23BP54727 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAD23BP54727 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAD23BP54727 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAD23BP54727 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAD23BP54727 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAD23BP54727 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAD23BP54727 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RAD23BP54727 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.3■□□□□ 0.68
RAD23BP54727 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RAD23BP54727 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAD23BP54727 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RAD23BP54727 AP000997.3-201ENST00000623333 2250 ntBASIC19.3■□□□□ 0.68
RAD23BP54727 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RAD23BP54727 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RAD23BP54727 AL133373.2-201ENST00000623187 2828 ntBASIC19.29■□□□□ 0.68
RAD23BP54727 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAD23BP54727 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAD23BP54727 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAD23BP54727 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAD23BP54727 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAD23BP54727 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAD23BP54727 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAD23BP54727 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.29■□□□□ 0.68
RAD23BP54727 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAD23BP54727 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RAD23BP54727 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RAD23BP54727 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAD23BP54727 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAD23BP54727 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RAD23BP54727 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.29■□□□□ 0.68
RAD23BP54727 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.29■□□□□ 0.68
RAD23BP54727 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAD23BP54727 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.29■□□□□ 0.68
RAD23BP54727 AC011498.5-201ENST00000592027 486 ntBASIC19.29■□□□□ 0.68
RAD23BP54727 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
RAD23BP54727 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.29■□□□□ 0.68
RAD23BP54727 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAD23BP54727 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAD23BP54727 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAD23BP54727 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RAD23BP54727 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.28■□□□□ 0.68
RAD23BP54727 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RAD23BP54727 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
RAD23BP54727 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.28■□□□□ 0.68
RAD23BP54727 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.28■□□□□ 0.68
RAD23BP54727 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RAD23BP54727 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.28■□□□□ 0.68
RAD23BP54727 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.28■□□□□ 0.68
RAD23BP54727 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.28■□□□□ 0.68
RAD23BP54727 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.28■□□□□ 0.68
RAD23BP54727 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.28■□□□□ 0.68
RAD23BP54727 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RAD23BP54727 AL358472.4-201ENST00000633140 710 ntBASIC19.28■□□□□ 0.68
RAD23BP54727 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.28■□□□□ 0.68
RAD23BP54727 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RAD23BP54727 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.28■□□□□ 0.68
RAD23BP54727 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.28■□□□□ 0.68
RAD23BP54727 AL353692.3-201ENST00000407031 1396 ntBASIC19.28■□□□□ 0.68
RAD23BP54727 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAD23BP54727 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.28■□□□□ 0.68
RAD23BP54727 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms