Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.65■□□□□ 0.42
CSNK1EP49674 AC055717.3-201ENST00000622967 595 ntBASIC17.65■□□□□ 0.42
CSNK1EP49674 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1EP49674 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CSNK1EP49674 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CSNK1EP49674 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1EP49674 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1EP49674 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CSNK1EP49674 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.65■□□□□ 0.42
CSNK1EP49674 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1EP49674 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1EP49674 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1EP49674 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1EP49674 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.64■□□□□ 0.42
CSNK1EP49674 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CSNK1EP49674 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1EP49674 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1EP49674 AP002414.3-201ENST00000589352 1468 ntBASIC17.64■□□□□ 0.41
CSNK1EP49674 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1EP49674 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1EP49674 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.64■□□□□ 0.41
CSNK1EP49674 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1EP49674 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.64■□□□□ 0.41
CSNK1EP49674 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1EP49674 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1EP49674 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.64■□□□□ 0.41
CSNK1EP49674 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.64■□□□□ 0.41
CSNK1EP49674 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1EP49674 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.64■□□□□ 0.41
CSNK1EP49674 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CSNK1EP49674 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1EP49674 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.64■□□□□ 0.41
CSNK1EP49674 KRT18P3-201ENST00000451602 1288 ntBASIC17.64■□□□□ 0.41
CSNK1EP49674 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.64■□□□□ 0.41
CSNK1EP49674 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.64■□□□□ 0.41
CSNK1EP49674 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.64■□□□□ 0.41
CSNK1EP49674 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.64■□□□□ 0.41
CSNK1EP49674 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.64■□□□□ 0.41
CSNK1EP49674 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CSNK1EP49674 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CSNK1EP49674 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1EP49674 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.64■□□□□ 0.41
CSNK1EP49674 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CSNK1EP49674 AC107918.4-202ENST00000641623 219 ntBASIC17.64■□□□□ 0.41
CSNK1EP49674 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1EP49674 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.64■□□□□ 0.41
CSNK1EP49674 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1EP49674 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1EP49674 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1EP49674 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.64■□□□□ 0.41
CSNK1EP49674 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1EP49674 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1EP49674 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
CSNK1EP49674 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1EP49674 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1EP49674 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1EP49674 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CSNK1EP49674 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CSNK1EP49674 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1EP49674 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.63■□□□□ 0.41
CSNK1EP49674 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.63■□□□□ 0.41
CSNK1EP49674 AC007967.3-201ENST00000434308 558 ntBASIC17.63■□□□□ 0.41
CSNK1EP49674 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.63■□□□□ 0.41
CSNK1EP49674 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1EP49674 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.63■□□□□ 0.41
CSNK1EP49674 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.63■□□□□ 0.41
CSNK1EP49674 AC010327.4-202ENST00000591484 748 ntBASIC17.63■□□□□ 0.41
CSNK1EP49674 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1EP49674 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1EP49674 AP000867.4-201ENST00000641616 219 ntBASIC17.63■□□□□ 0.41
CSNK1EP49674 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1EP49674 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1EP49674 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1EP49674 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1EP49674 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1EP49674 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CSNK1EP49674 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.62■□□□□ 0.41
CSNK1EP49674 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CSNK1EP49674 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1EP49674 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1EP49674 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1EP49674 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1EP49674 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.62■□□□□ 0.41
CSNK1EP49674 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CSNK1EP49674 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1EP49674 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CSNK1EP49674 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.62■□□□□ 0.41
CSNK1EP49674 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1EP49674 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.62■□□□□ 0.41
CSNK1EP49674 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.62■□□□□ 0.41
CSNK1EP49674 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CSNK1EP49674 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.62■□□□□ 0.41
CSNK1EP49674 UNC93B6-202ENST00000528242 690 ntBASIC17.62■□□□□ 0.41
CSNK1EP49674 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.62■□□□□ 0.41
CSNK1EP49674 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1EP49674 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.62■□□□□ 0.41
CSNK1EP49674 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1EP49674 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1EP49674 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSNK1EP49674 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms