Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASP4P49662 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.7■□□□□ 0.74
CASP4P49662 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.7■□□□□ 0.74
CASP4P49662 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASP4P49662 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASP4P49662 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.7■□□□□ 0.74
CASP4P49662 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.7■□□□□ 0.74
CASP4P49662 ZNF444P1-201ENST00000559497 298 ntBASIC19.7■□□□□ 0.74
CASP4P49662 LINC01238-205ENST00000567549 1107 ntBASIC19.7■□□□□ 0.74
CASP4P49662 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.7■□□□□ 0.74
CASP4P49662 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASP4P49662 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASP4P49662 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASP4P49662 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASP4P49662 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CASP4P49662 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.7■□□□□ 0.74
CASP4P49662 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
CASP4P49662 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASP4P49662 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CASP4P49662 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CASP4P49662 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASP4P49662 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASP4P49662 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CASP4P49662 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CASP4P49662 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CASP4P49662 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASP4P49662 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CASP4P49662 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASP4P49662 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CASP4P49662 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASP4P49662 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CASP4P49662 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASP4P49662 IGHGP-201ENST00000390555 1178 ntBASIC19.69■□□□□ 0.74
CASP4P49662 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASP4P49662 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASP4P49662 SLC25A6P5-201ENST00000435663 894 ntBASIC19.69■□□□□ 0.74
CASP4P49662 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CASP4P49662 AP003733.1-201ENST00000491725 852 ntBASIC19.69■□□□□ 0.74
CASP4P49662 AC010331.1-201ENST00000611423 582 ntBASIC19.69■□□□□ 0.74
CASP4P49662 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASP4P49662 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASP4P49662 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.69■□□□□ 0.74
CASP4P49662 KRT18P55-202ENST00000578578 1546 ntBASIC19.69■□□□□ 0.74
CASP4P49662 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CASP4P49662 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASP4P49662 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
CASP4P49662 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.69■□□□□ 0.74
CASP4P49662 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASP4P49662 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CASP4P49662 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.69■□□□□ 0.74
CASP4P49662 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASP4P49662 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASP4P49662 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.69■□□□□ 0.74
CASP4P49662 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASP4P49662 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.68■□□□□ 0.74
CASP4P49662 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.68■□□□□ 0.74
CASP4P49662 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CASP4P49662 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASP4P49662 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.68■□□□□ 0.74
CASP4P49662 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASP4P49662 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CASP4P49662 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CASP4P49662 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.68■□□□□ 0.74
CASP4P49662 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.68■□□□□ 0.74
CASP4P49662 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.68■□□□□ 0.74
CASP4P49662 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CASP4P49662 KRT18P35-201ENST00000510488 1269 ntBASIC19.68■□□□□ 0.74
CASP4P49662 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.68■□□□□ 0.74
CASP4P49662 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.68■□□□□ 0.74
CASP4P49662 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.68■□□□□ 0.74
CASP4P49662 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.68■□□□□ 0.74
CASP4P49662 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.68■□□□□ 0.74
CASP4P49662 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CASP4P49662 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.68■□□□□ 0.74
CASP4P49662 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CASP4P49662 AC026471.1-201ENST00000564629 3026 ntBASIC19.68■□□□□ 0.74
CASP4P49662 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.68■□□□□ 0.74
CASP4P49662 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASP4P49662 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASP4P49662 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CASP4P49662 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CASP4P49662 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CASP4P49662 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASP4P49662 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASP4P49662 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CASP4P49662 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASP4P49662 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.67■□□□□ 0.74
CASP4P49662 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASP4P49662 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CASP4P49662 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASP4P49662 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASP4P49662 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
CASP4P49662 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASP4P49662 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASP4P49662 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASP4P49662 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASP4P49662 MIR1224-201ENST00000408193 85 ntBASIC19.67■□□□□ 0.74
CASP4P49662 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.67■□□□□ 0.74
CASP4P49662 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.67■□□□□ 0.74
CASP4P49662 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms