Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX3P48380 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RFX3P48380 BICD1-207ENST00000551848 1962 ntBASIC17■□□□□ 0.31
RFX3P48380 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17■□□□□ 0.31
RFX3P48380 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17■□□□□ 0.31
RFX3P48380 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17■□□□□ 0.31
RFX3P48380 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17■□□□□ 0.31
RFX3P48380 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RFX3P48380 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 MIR149-201ENST00000384879 89 ntBASIC17■□□□□ 0.31
RFX3P48380 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RFX3P48380 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17■□□□□ 0.31
RFX3P48380 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17■□□□□ 0.31
RFX3P48380 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 GMCL1P1-201ENST00000463439 1581 ntBASIC17■□□□□ 0.31
RFX3P48380 SEC1P-202ENST00000473944 940 ntBASIC17■□□□□ 0.31
RFX3P48380 COX11P1-201ENST00000489116 835 ntBASIC17■□□□□ 0.31
RFX3P48380 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17■□□□□ 0.31
RFX3P48380 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17■□□□□ 0.31
RFX3P48380 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17■□□□□ 0.31
RFX3P48380 GCSHP2-201ENST00000560971 527 ntBASIC17■□□□□ 0.31
RFX3P48380 TK2-213ENST00000563369 882 ntTSL 5 BASIC17■□□□□ 0.31
RFX3P48380 AC009065.1-201ENST00000564055 1225 ntBASIC17■□□□□ 0.31
RFX3P48380 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17■□□□□ 0.31
RFX3P48380 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17■□□□□ 0.31
RFX3P48380 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
RFX3P48380 AC139887.4-201ENST00000607877 719 ntBASIC17■□□□□ 0.31
RFX3P48380 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17■□□□□ 0.31
RFX3P48380 AC092865.7-201ENST00000641832 219 ntBASIC17■□□□□ 0.31
RFX3P48380 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17■□□□□ 0.31
RFX3P48380 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RFX3P48380 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 NOC2LP1-202ENST00000452600 2235 ntBASIC17■□□□□ 0.31
RFX3P48380 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RFX3P48380 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RFX3P48380 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX3P48380 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX3P48380 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX3P48380 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RFX3P48380 SDHAP2-201ENST00000455183 2001 ntBASIC16.99■□□□□ 0.31
RFX3P48380 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX3P48380 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
RFX3P48380 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX3P48380 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.99■□□□□ 0.31
RFX3P48380 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX3P48380 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX3P48380 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX3P48380 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RFX3P48380 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX3P48380 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX3P48380 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX3P48380 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.99■□□□□ 0.31
RFX3P48380 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.99■□□□□ 0.31
RFX3P48380 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX3P48380 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
RFX3P48380 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX3P48380 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX3P48380 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX3P48380 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RFX3P48380 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.99■□□□□ 0.31
RFX3P48380 AL354751.1-201ENST00000412768 1863 ntBASIC16.99■□□□□ 0.31
RFX3P48380 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.99■□□□□ 0.31
RFX3P48380 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX3P48380 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX3P48380 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX3P48380 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX3P48380 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX3P48380 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX3P48380 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX3P48380 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX3P48380 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX3P48380 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX3P48380 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX3P48380 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX3P48380 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX3P48380 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.98■□□□□ 0.31
RFX3P48380 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX3P48380 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX3P48380 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms