Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
USP8P40818 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP8P40818 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
USP8P40818 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.69■□□□□ 0.74
USP8P40818 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP8P40818 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
USP8P40818 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.69■□□□□ 0.74
USP8P40818 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.69■□□□□ 0.74
USP8P40818 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.69■□□□□ 0.74
USP8P40818 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.69■□□□□ 0.74
USP8P40818 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.69■□□□□ 0.74
USP8P40818 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.69■□□□□ 0.74
USP8P40818 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP8P40818 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
USP8P40818 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP8P40818 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.69■□□□□ 0.74
USP8P40818 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP8P40818 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP8P40818 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.68■□□□□ 0.74
USP8P40818 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP8P40818 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
USP8P40818 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
USP8P40818 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP8P40818 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP8P40818 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
USP8P40818 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP8P40818 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.68■□□□□ 0.74
USP8P40818 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.68■□□□□ 0.74
USP8P40818 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP8P40818 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP8P40818 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP8P40818 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP8P40818 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.68■□□□□ 0.74
USP8P40818 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
USP8P40818 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP8P40818 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.68■□□□□ 0.74
USP8P40818 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.68■□□□□ 0.74
USP8P40818 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.68■□□□□ 0.74
USP8P40818 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.68■□□□□ 0.74
USP8P40818 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP8P40818 AC145285.6-201ENST00000604632 637 ntBASIC19.68■□□□□ 0.74
USP8P40818 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.68■□□□□ 0.74
USP8P40818 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP8P40818 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
USP8P40818 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP8P40818 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
USP8P40818 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.68■□□□□ 0.74
USP8P40818 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP8P40818 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP8P40818 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP8P40818 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP8P40818 AC068880.1-201ENST00000507289 2297 ntBASIC19.68■□□□□ 0.74
USP8P40818 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.68■□□□□ 0.74
USP8P40818 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.68■□□□□ 0.74
USP8P40818 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
USP8P40818 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
USP8P40818 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
USP8P40818 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
USP8P40818 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP8P40818 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.67■□□□□ 0.74
USP8P40818 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.67■□□□□ 0.74
USP8P40818 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP8P40818 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
USP8P40818 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.67■□□□□ 0.74
USP8P40818 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP8P40818 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP8P40818 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.67■□□□□ 0.74
USP8P40818 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP8P40818 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.67■□□□□ 0.74
USP8P40818 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.67■□□□□ 0.74
USP8P40818 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.67■□□□□ 0.74
USP8P40818 AC010240.3-201ENST00000607688 395 ntBASIC19.67■□□□□ 0.74
USP8P40818 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
USP8P40818 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.67■□□□□ 0.74
USP8P40818 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP8P40818 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
USP8P40818 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP8P40818 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.67■□□□□ 0.74
USP8P40818 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP8P40818 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP8P40818 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP8P40818 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
USP8P40818 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.67■□□□□ 0.74
USP8P40818 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.67■□□□□ 0.74
USP8P40818 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP8P40818 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.66■□□□□ 0.74
USP8P40818 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
USP8P40818 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
USP8P40818 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
USP8P40818 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP8P40818 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms