Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CEACAM3P40198 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CEACAM3P40198 NOC2LP1-202ENST00000452600 2235 ntBASIC14.74□□□□□ -0.05
CEACAM3P40198 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CEACAM3P40198 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CEACAM3P40198 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.74□□□□□ -0.05
CEACAM3P40198 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CEACAM3P40198 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CEACAM3P40198 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CEACAM3P40198 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CEACAM3P40198 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
CEACAM3P40198 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CEACAM3P40198 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CEACAM3P40198 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CEACAM3P40198 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CEACAM3P40198 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.74□□□□□ -0.05
CEACAM3P40198 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.74□□□□□ -0.05
CEACAM3P40198 MIR662-201ENST00000384847 95 ntBASIC14.74□□□□□ -0.05
CEACAM3P40198 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.74□□□□□ -0.05
CEACAM3P40198 AL645929.1-201ENST00000420084 975 ntBASIC14.74□□□□□ -0.05
CEACAM3P40198 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
CEACAM3P40198 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.74□□□□□ -0.05
CEACAM3P40198 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.74□□□□□ -0.05
CEACAM3P40198 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.74□□□□□ -0.05
CEACAM3P40198 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.74□□□□□ -0.05
CEACAM3P40198 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CEACAM3P40198 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CEACAM3P40198 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CEACAM3P40198 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CEACAM3P40198 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CEACAM3P40198 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CEACAM3P40198 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CEACAM3P40198 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CEACAM3P40198 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CEACAM3P40198 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CEACAM3P40198 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CEACAM3P40198 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CEACAM3P40198 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CEACAM3P40198 NFIC-211ENST00000641145 8399 ntBASIC14.74□□□□□ -0.05
CEACAM3P40198 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.74□□□□□ -0.05
CEACAM3P40198 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CEACAM3P40198 AC099343.3-201ENST00000605834 2503 ntBASIC14.73□□□□□ -0.05
CEACAM3P40198 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CEACAM3P40198 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CEACAM3P40198 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CEACAM3P40198 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CEACAM3P40198 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
CEACAM3P40198 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CEACAM3P40198 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.73□□□□□ -0.05
CEACAM3P40198 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CEACAM3P40198 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CEACAM3P40198 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CEACAM3P40198 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CEACAM3P40198 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CEACAM3P40198 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CEACAM3P40198 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CEACAM3P40198 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CEACAM3P40198 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CEACAM3P40198 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CEACAM3P40198 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.73□□□□□ -0.05
CEACAM3P40198 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.73□□□□□ -0.05
CEACAM3P40198 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.73□□□□□ -0.05
CEACAM3P40198 AL136038.3-201ENST00000561909 1096 ntBASIC14.73□□□□□ -0.05
CEACAM3P40198 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.73□□□□□ -0.05
CEACAM3P40198 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CEACAM3P40198 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.73□□□□□ -0.05
CEACAM3P40198 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CEACAM3P40198 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.73□□□□□ -0.05
CEACAM3P40198 GPR32P1-201ENST00000601788 811 ntBASIC14.73□□□□□ -0.05
CEACAM3P40198 HYMAI.1-201ENST00000620949 238 ntBASIC14.73□□□□□ -0.05
CEACAM3P40198 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CEACAM3P40198 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CEACAM3P40198 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CEACAM3P40198 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CEACAM3P40198 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.73□□□□□ -0.05
CEACAM3P40198 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CEACAM3P40198 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CEACAM3P40198 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CEACAM3P40198 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.72□□□□□ -0.05
CEACAM3P40198 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CEACAM3P40198 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CEACAM3P40198 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.72□□□□□ -0.05
CEACAM3P40198 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CEACAM3P40198 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CEACAM3P40198 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CEACAM3P40198 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CEACAM3P40198 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CEACAM3P40198 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CEACAM3P40198 AC009113.1-201ENST00000570267 2443 ntBASIC14.72□□□□□ -0.05
CEACAM3P40198 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CEACAM3P40198 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.72□□□□□ -0.05
CEACAM3P40198 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CEACAM3P40198 ARMC10P1-201ENST00000313754 855 ntBASIC14.72□□□□□ -0.05
CEACAM3P40198 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CEACAM3P40198 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.72□□□□□ -0.05
CEACAM3P40198 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CEACAM3P40198 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CEACAM3P40198 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.72□□□□□ -0.05
CEACAM3P40198 AL031133.1-201ENST00000406807 723 ntBASIC14.72□□□□□ -0.05
CEACAM3P40198 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms