Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.42■□□□□ 0.7
CASQ1P31415 MYC-209ENST00000641252 345 ntBASIC19.42■□□□□ 0.7
CASQ1P31415 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.42■□□□□ 0.7
CASQ1P31415 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ1P31415 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ1P31415 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ1P31415 AC093010.1-201ENST00000473625 1624 ntBASIC19.42■□□□□ 0.7
CASQ1P31415 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CASQ1P31415 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CASQ1P31415 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ1P31415 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CASQ1P31415 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ1P31415 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.42■□□□□ 0.7
CASQ1P31415 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.42■□□□□ 0.7
CASQ1P31415 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ1P31415 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
CASQ1P31415 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ1P31415 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.41■□□□□ 0.7
CASQ1P31415 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.41■□□□□ 0.7
CASQ1P31415 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.41■□□□□ 0.7
CASQ1P31415 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ1P31415 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ1P31415 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ1P31415 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ1P31415 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ1P31415 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ1P31415 MIR564-202ENST00000385049 94 ntBASIC19.41■□□□□ 0.7
CASQ1P31415 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.41■□□□□ 0.7
CASQ1P31415 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ1P31415 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ1P31415 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CASQ1P31415 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ1P31415 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ1P31415 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CASQ1P31415 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ1P31415 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
CASQ1P31415 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.41■□□□□ 0.7
CASQ1P31415 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.41■□□□□ 0.7
CASQ1P31415 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ1P31415 KRT8P50-201ENST00000562022 1438 ntBASIC19.41■□□□□ 0.7
CASQ1P31415 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ1P31415 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CASQ1P31415 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ1P31415 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASQ1P31415 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CASQ1P31415 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.4■□□□□ 0.7
CASQ1P31415 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.4■□□□□ 0.7
CASQ1P31415 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASQ1P31415 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.4■□□□□ 0.7
CASQ1P31415 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.4■□□□□ 0.7
CASQ1P31415 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.4■□□□□ 0.7
CASQ1P31415 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASQ1P31415 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.4■□□□□ 0.7
CASQ1P31415 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CASQ1P31415 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.4■□□□□ 0.7
CASQ1P31415 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CASQ1P31415 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.4■□□□□ 0.7
CASQ1P31415 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASQ1P31415 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CASQ1P31415 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CASQ1P31415 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CASQ1P31415 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASQ1P31415 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASQ1P31415 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CASQ1P31415 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASQ1P31415 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CASQ1P31415 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASQ1P31415 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CASQ1P31415 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.4■□□□□ 0.7
CASQ1P31415 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CASQ1P31415 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.7
CASQ1P31415 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CASQ1P31415 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CASQ1P31415 AL596257.1-201ENST00000641463 2694 ntBASIC19.39■□□□□ 0.7
CASQ1P31415 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.39■□□□□ 0.7
CASQ1P31415 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CASQ1P31415 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
CASQ1P31415 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CASQ1P31415 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CASQ1P31415 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.39■□□□□ 0.7
CASQ1P31415 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.39■□□□□ 0.7
CASQ1P31415 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
CASQ1P31415 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASQ1P31415 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASQ1P31415 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASQ1P31415 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASQ1P31415 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
CASQ1P31415 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CASQ1P31415 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.39■□□□□ 0.69
CASQ1P31415 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CASQ1P31415 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.39■□□□□ 0.69
CASQ1P31415 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CASQ1P31415 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.39■□□□□ 0.69
CASQ1P31415 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.39■□□□□ 0.69
CASQ1P31415 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.39■□□□□ 0.69
CASQ1P31415 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CASQ1P31415 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.39■□□□□ 0.69
CASQ1P31415 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASQ1P31415 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASQ1P31415 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms