Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 AC087499.1-201ENST00000418141 1075 ntBASIC17.19■□□□□ 0.34
PRPH2P23942 AC116407.2-201ENST00000613639 860 ntBASIC17.19■□□□□ 0.34
PRPH2P23942 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
PRPH2P23942 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PRPH2P23942 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRPH2P23942 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.19■□□□□ 0.34
PRPH2P23942 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRPH2P23942 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRPH2P23942 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRPH2P23942 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
PRPH2P23942 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.19■□□□□ 0.34
PRPH2P23942 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.18■□□□□ 0.34
PRPH2P23942 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRPH2P23942 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRPH2P23942 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRPH2P23942 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRPH2P23942 LINC00304-203ENST00000565008 1864 ntBASIC17.18■□□□□ 0.34
PRPH2P23942 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.18■□□□□ 0.34
PRPH2P23942 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRPH2P23942 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRPH2P23942 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.18■□□□□ 0.34
PRPH2P23942 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.18■□□□□ 0.34
PRPH2P23942 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRPH2P23942 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRPH2P23942 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRPH2P23942 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.18■□□□□ 0.34
PRPH2P23942 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRPH2P23942 SLC25A3P1-201ENST00000443844 931 ntBASIC17.18■□□□□ 0.34
PRPH2P23942 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRPH2P23942 RASA4DP-201ENST00000460726 1199 ntBASIC17.18■□□□□ 0.34
PRPH2P23942 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.18■□□□□ 0.34
PRPH2P23942 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
PRPH2P23942 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.18■□□□□ 0.34
PRPH2P23942 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.18■□□□□ 0.34
PRPH2P23942 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PRPH2P23942 AL031432.5-201ENST00000641059 760 ntBASIC17.18■□□□□ 0.34
PRPH2P23942 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
PRPH2P23942 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.18■□□□□ 0.34
PRPH2P23942 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.18■□□□□ 0.34
PRPH2P23942 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PRPH2P23942 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRPH2P23942 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRPH2P23942 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRPH2P23942 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PRPH2P23942 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.18■□□□□ 0.34
PRPH2P23942 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRPH2P23942 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRPH2P23942 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRPH2P23942 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.18■□□□□ 0.34
PRPH2P23942 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.18■□□□□ 0.34
PRPH2P23942 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRPH2P23942 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
PRPH2P23942 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.17■□□□□ 0.34
PRPH2P23942 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PRPH2P23942 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PRPH2P23942 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRPH2P23942 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRPH2P23942 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.17■□□□□ 0.34
PRPH2P23942 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.17■□□□□ 0.34
PRPH2P23942 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.17■□□□□ 0.34
PRPH2P23942 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRPH2P23942 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRPH2P23942 DDX43P3-201ENST00000441064 443 ntBASIC17.17■□□□□ 0.34
PRPH2P23942 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRPH2P23942 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRPH2P23942 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PRPH2P23942 AC093827.2-201ENST00000512654 315 ntBASIC17.17■□□□□ 0.34
PRPH2P23942 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PRPH2P23942 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.17■□□□□ 0.34
PRPH2P23942 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.17■□□□□ 0.34
PRPH2P23942 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.17■□□□□ 0.34
PRPH2P23942 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PRPH2P23942 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.17■□□□□ 0.34
PRPH2P23942 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.17■□□□□ 0.34
PRPH2P23942 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRPH2P23942 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.17■□□□□ 0.34
PRPH2P23942 PP12613-201ENST00000424958 2230 ntBASIC17.17■□□□□ 0.34
PRPH2P23942 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRPH2P23942 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
PRPH2P23942 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PRPH2P23942 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PRPH2P23942 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.17■□□□□ 0.34
PRPH2P23942 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRPH2P23942 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRPH2P23942 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRPH2P23942 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PRPH2P23942 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PRPH2P23942 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.16■□□□□ 0.34
PRPH2P23942 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PRPH2P23942 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.16■□□□□ 0.34
PRPH2P23942 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRPH2P23942 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.16■□□□□ 0.34
PRPH2P23942 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRPH2P23942 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRPH2P23942 AL391807.1-203ENST00000604392 2365 ntBASIC17.16■□□□□ 0.34
PRPH2P23942 AC139713.2-201ENST00000641328 2723 ntBASIC17.16■□□□□ 0.34
PRPH2P23942 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
PRPH2P23942 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRPH2P23942 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRPH2P23942 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms