Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL845331.1-201ENST00000424978 1190 ntBASIC19.68■□□□□ 0.74
RFX1P22670 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.68■□□□□ 0.74
RFX1P22670 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.68■□□□□ 0.74
RFX1P22670 AC008687.5-201ENST00000593746 558 ntBASIC19.68■□□□□ 0.74
RFX1P22670 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.68■□□□□ 0.74
RFX1P22670 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RFX1P22670 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.68■□□□□ 0.74
RFX1P22670 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFX1P22670 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RFX1P22670 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.67■□□□□ 0.74
RFX1P22670 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX1P22670 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RFX1P22670 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.67■□□□□ 0.74
RFX1P22670 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX1P22670 AL024508.2-201ENST00000607749 1894 ntBASIC19.67■□□□□ 0.74
RFX1P22670 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX1P22670 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX1P22670 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX1P22670 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFX1P22670 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.67■□□□□ 0.74
RFX1P22670 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.67■□□□□ 0.74
RFX1P22670 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.67■□□□□ 0.74
RFX1P22670 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.67■□□□□ 0.74
RFX1P22670 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.67■□□□□ 0.74
RFX1P22670 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.67■□□□□ 0.74
RFX1P22670 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RFX1P22670 GCSHP2-201ENST00000560971 527 ntBASIC19.67■□□□□ 0.74
RFX1P22670 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.67■□□□□ 0.74
RFX1P22670 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RFX1P22670 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFX1P22670 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX1P22670 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.67■□□□□ 0.74
RFX1P22670 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFX1P22670 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX1P22670 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFX1P22670 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFX1P22670 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.67■□□□□ 0.74
RFX1P22670 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFX1P22670 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFX1P22670 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX1P22670 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.66■□□□□ 0.74
RFX1P22670 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RFX1P22670 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFX1P22670 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX1P22670 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RFX1P22670 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX1P22670 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX1P22670 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX1P22670 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX1P22670 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
RFX1P22670 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX1P22670 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.66■□□□□ 0.74
RFX1P22670 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.66■□□□□ 0.74
RFX1P22670 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.66■□□□□ 0.74
RFX1P22670 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RFX1P22670 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.66■□□□□ 0.74
RFX1P22670 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFX1P22670 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.66■□□□□ 0.74
RFX1P22670 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX1P22670 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX1P22670 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFX1P22670 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RFX1P22670 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX1P22670 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX1P22670 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFX1P22670 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.65■□□□□ 0.74
RFX1P22670 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX1P22670 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.65■□□□□ 0.74
RFX1P22670 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX1P22670 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RFX1P22670 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.65■□□□□ 0.74
RFX1P22670 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX1P22670 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX1P22670 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RFX1P22670 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
RFX1P22670 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.65■□□□□ 0.74
RFX1P22670 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
RFX1P22670 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RFX1P22670 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RFX1P22670 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.65■□□□□ 0.74
RFX1P22670 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX1P22670 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX1P22670 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RFX1P22670 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RFX1P22670 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.65■□□□□ 0.74
RFX1P22670 GPALPP1-207ENST00000611650 899 ntBASIC19.65■□□□□ 0.74
RFX1P22670 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX1P22670 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
RFX1P22670 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX1P22670 LINC01126-201ENST00000623515 1646 ntBASIC19.65■□□□□ 0.74
RFX1P22670 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX1P22670 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX1P22670 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFX1P22670 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.65■□□□□ 0.74
RFX1P22670 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
RFX1P22670 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.64■□□□□ 0.74
RFX1P22670 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RFX1P22670 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RFX1P22670 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
RFX1P22670 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms