Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.58□□□□□ -0.08
NF1P21359 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NF1P21359 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.58□□□□□ -0.08
NF1P21359 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.58□□□□□ -0.08
NF1P21359 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NF1P21359 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.58□□□□□ -0.08
NF1P21359 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NF1P21359 RCC2P3-201ENST00000418112 1537 ntBASIC14.58□□□□□ -0.08
NF1P21359 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NF1P21359 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.58□□□□□ -0.08
NF1P21359 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
NF1P21359 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NF1P21359 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
NF1P21359 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NF1P21359 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NF1P21359 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.58□□□□□ -0.08
NF1P21359 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.58□□□□□ -0.08
NF1P21359 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.58□□□□□ -0.08
NF1P21359 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NF1P21359 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.58□□□□□ -0.08
NF1P21359 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NF1P21359 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
NF1P21359 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.58□□□□□ -0.08
NF1P21359 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.58□□□□□ -0.08
NF1P21359 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NF1P21359 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.57□□□□□ -0.08
NF1P21359 AC006504.4-201ENST00000592118 1568 ntBASIC14.57□□□□□ -0.08
NF1P21359 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NF1P21359 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
NF1P21359 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NF1P21359 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.57□□□□□ -0.08
NF1P21359 SERBP1P5-201ENST00000510079 1181 ntBASIC14.57□□□□□ -0.08
NF1P21359 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.57□□□□□ -0.08
NF1P21359 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NF1P21359 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NF1P21359 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.57□□□□□ -0.08
NF1P21359 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NF1P21359 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.57□□□□□ -0.08
NF1P21359 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NF1P21359 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NF1P21359 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.57□□□□□ -0.08
NF1P21359 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.57□□□□□ -0.08
NF1P21359 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.57□□□□□ -0.08
NF1P21359 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
NF1P21359 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.57□□□□□ -0.08
NF1P21359 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NF1P21359 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NF1P21359 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NF1P21359 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.57□□□□□ -0.08
NF1P21359 AL357033.4-201ENST00000617703 1807 ntBASIC14.57□□□□□ -0.08
NF1P21359 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NF1P21359 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NF1P21359 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NF1P21359 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.57□□□□□ -0.08
NF1P21359 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NF1P21359 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NF1P21359 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
NF1P21359 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NF1P21359 AC113404.2-201ENST00000507884 177 ntBASIC14.56□□□□□ -0.08
NF1P21359 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.56□□□□□ -0.08
NF1P21359 AL512356.2-201ENST00000546955 174 ntBASIC14.56□□□□□ -0.08
NF1P21359 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.56□□□□□ -0.08
NF1P21359 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NF1P21359 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.56□□□□□ -0.08
NF1P21359 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NF1P21359 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.56□□□□□ -0.08
NF1P21359 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NF1P21359 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NF1P21359 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.56□□□□□ -0.08
NF1P21359 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NF1P21359 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC14.56□□□□□ -0.08
NF1P21359 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NF1P21359 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.56□□□□□ -0.08
NF1P21359 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.56□□□□□ -0.08
NF1P21359 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NF1P21359 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.56□□□□□ -0.08
NF1P21359 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NF1P21359 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NF1P21359 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NF1P21359 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NF1P21359 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NF1P21359 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NF1P21359 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NF1P21359 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.56□□□□□ -0.08
NF1P21359 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.56□□□□□ -0.08
NF1P21359 AL049812.1-201ENST00000432563 2267 ntBASIC14.56□□□□□ -0.08
NF1P21359 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.56□□□□□ -0.08
NF1P21359 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NF1P21359 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NF1P21359 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.56□□□□□ -0.08
NF1P21359 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NF1P21359 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.56□□□□□ -0.08
NF1P21359 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.56□□□□□ -0.08
NF1P21359 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NF1P21359 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NF1P21359 CU639417.3-201ENST00000624240 1404 ntBASIC14.55□□□□□ -0.08
NF1P21359 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NF1P21359 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NF1P21359 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.55□□□□□ -0.08
NF1P21359 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms