Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.68■□□□□ 0.42
HOXB3P14651 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.68■□□□□ 0.42
HOXB3P14651 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
HOXB3P14651 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.68■□□□□ 0.42
HOXB3P14651 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXB3P14651 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.68■□□□□ 0.42
HOXB3P14651 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXB3P14651 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
HOXB3P14651 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.68■□□□□ 0.42
HOXB3P14651 AL138781.2-201ENST00000617896 1843 ntBASIC17.68■□□□□ 0.42
HOXB3P14651 AL163051.1-201ENST00000569214 1512 ntBASIC17.67■□□□□ 0.42
HOXB3P14651 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXB3P14651 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXB3P14651 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXB3P14651 AC112777.1-201ENST00000540175 1423 ntBASIC17.67■□□□□ 0.42
HOXB3P14651 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXB3P14651 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.67■□□□□ 0.42
HOXB3P14651 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXB3P14651 CYMP-203ENST00000474680 1263 ntBASIC17.67■□□□□ 0.42
HOXB3P14651 HMGB3P14-201ENST00000494195 599 ntBASIC17.67■□□□□ 0.42
HOXB3P14651 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.67■□□□□ 0.42
HOXB3P14651 AL773604.1-201ENST00000617417 272 ntBASIC17.67■□□□□ 0.42
HOXB3P14651 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.67■□□□□ 0.42
HOXB3P14651 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.67■□□□□ 0.42
HOXB3P14651 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC17.67■□□□□ 0.42
HOXB3P14651 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.67■□□□□ 0.42
HOXB3P14651 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXB3P14651 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXB3P14651 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXB3P14651 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXB3P14651 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
HOXB3P14651 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXB3P14651 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
HOXB3P14651 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HOXB3P14651 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXB3P14651 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
HOXB3P14651 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXB3P14651 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HOXB3P14651 LINC00167-201ENST00000530583 1419 ntBASIC17.66■□□□□ 0.42
HOXB3P14651 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.66■□□□□ 0.42
HOXB3P14651 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
HOXB3P14651 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXB3P14651 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXB3P14651 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXB3P14651 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXB3P14651 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
HOXB3P14651 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.66■□□□□ 0.42
HOXB3P14651 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.66■□□□□ 0.42
HOXB3P14651 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXB3P14651 RPL13AP23-201ENST00000480739 586 ntBASIC17.66■□□□□ 0.42
HOXB3P14651 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.66■□□□□ 0.42
HOXB3P14651 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.66■□□□□ 0.42
HOXB3P14651 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXB3P14651 AC009065.1-201ENST00000564055 1225 ntBASIC17.66■□□□□ 0.42
HOXB3P14651 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.66■□□□□ 0.42
HOXB3P14651 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.66■□□□□ 0.42
HOXB3P14651 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXB3P14651 AC124864.1-201ENST00000623408 392 ntBASIC17.66■□□□□ 0.42
HOXB3P14651 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXB3P14651 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.66■□□□□ 0.42
HOXB3P14651 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXB3P14651 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXB3P14651 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXB3P14651 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXB3P14651 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXB3P14651 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXB3P14651 AC009113.1-201ENST00000570267 2443 ntBASIC17.66■□□□□ 0.42
HOXB3P14651 AC233702.3-201ENST00000578656 1387 ntBASIC17.66■□□□□ 0.42
HOXB3P14651 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXB3P14651 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXB3P14651 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXB3P14651 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HOXB3P14651 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
HOXB3P14651 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXB3P14651 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXB3P14651 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXB3P14651 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXB3P14651 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXB3P14651 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXB3P14651 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXB3P14651 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXB3P14651 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXB3P14651 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXB3P14651 AL031284.1-201ENST00000419297 478 ntBASIC17.65■□□□□ 0.42
HOXB3P14651 AC004967.1-201ENST00000453589 447 ntBASIC17.65■□□□□ 0.42
HOXB3P14651 RN7SL606P-201ENST00000472779 293 ntBASIC17.65■□□□□ 0.42
HOXB3P14651 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.65■□□□□ 0.42
HOXB3P14651 AC074051.2-201ENST00000565115 352 ntBASIC17.65■□□□□ 0.42
HOXB3P14651 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.65■□□□□ 0.42
HOXB3P14651 AC064862.7-201ENST00000604520 867 ntBASIC17.65■□□□□ 0.42
HOXB3P14651 AL592071.1-201ENST00000611956 408 ntBASIC17.65■□□□□ 0.42
HOXB3P14651 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.65■□□□□ 0.42
HOXB3P14651 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXB3P14651 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXB3P14651 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXB3P14651 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
HOXB3P14651 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXB3P14651 SDHAP2-201ENST00000455183 2001 ntBASIC17.65■□□□□ 0.42
HOXB3P14651 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
HOXB3P14651 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms