Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC093512.1-201ENST00000617969 520 ntBASIC30.74■■■□□ 2.51
CFTRP13569 AQP6-205ENST00000618286 829 ntTSL 5 BASIC30.74■■■□□ 2.51
CFTRP13569 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC30.74■■■□□ 2.51
CFTRP13569 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CFTRP13569 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
CFTRP13569 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
CFTRP13569 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC30.74■■■□□ 2.51
CFTRP13569 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
CFTRP13569 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC30.73■■■□□ 2.51
CFTRP13569 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC30.73■■■□□ 2.51
CFTRP13569 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CFTRP13569 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CFTRP13569 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
CFTRP13569 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC30.73■■■□□ 2.51
CFTRP13569 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC30.73■■■□□ 2.51
CFTRP13569 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC30.73■■■□□ 2.51
CFTRP13569 AC092902.6-201ENST00000641783 218 ntBASIC30.73■■■□□ 2.51
CFTRP13569 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
CFTRP13569 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CFTRP13569 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CFTRP13569 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC30.73■■■□□ 2.51
CFTRP13569 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CFTRP13569 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC30.72■■■□□ 2.51
CFTRP13569 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
CFTRP13569 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC30.72■■■□□ 2.51
CFTRP13569 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CFTRP13569 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CFTRP13569 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
CFTRP13569 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC30.72■■■□□ 2.51
CFTRP13569 COX5BP2-201ENST00000392354 334 ntBASIC30.72■■■□□ 2.51
CFTRP13569 MRPL20P1-201ENST00000400819 433 ntBASIC30.72■■■□□ 2.51
CFTRP13569 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC30.72■■■□□ 2.51
CFTRP13569 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC30.72■■■□□ 2.51
CFTRP13569 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC30.72■■■□□ 2.51
CFTRP13569 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
CFTRP13569 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CFTRP13569 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC30.72■■■□□ 2.51
CFTRP13569 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CFTRP13569 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
CFTRP13569 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
CFTRP13569 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC30.72■■■□□ 2.51
CFTRP13569 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC30.72■■■□□ 2.51
CFTRP13569 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CFTRP13569 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CFTRP13569 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CFTRP13569 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC30.71■■■□□ 2.51
CFTRP13569 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CFTRP13569 HLA-J-203ENST00000494367 1087 ntBASIC30.71■■■□□ 2.51
CFTRP13569 CCND1-203ENST00000536559 553 ntTSL 3 BASIC30.71■■■□□ 2.51
CFTRP13569 CD63-210ENST00000550776 870 ntTSL 5 BASIC30.71■■■□□ 2.51
CFTRP13569 GREM1-201ENST00000560677 623 ntTSL 4 BASIC30.71■■■□□ 2.51
CFTRP13569 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC30.71■■■□□ 2.51
CFTRP13569 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC30.71■■■□□ 2.51
CFTRP13569 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC30.71■■■□□ 2.51
CFTRP13569 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
CFTRP13569 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CFTRP13569 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC30.71■■■□□ 2.51
CFTRP13569 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CFTRP13569 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CFTRP13569 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CFTRP13569 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC30.7■■■□□ 2.51
CFTRP13569 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
CFTRP13569 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
CFTRP13569 KLF4P1-201ENST00000412782 1185 ntBASIC30.7■■■□□ 2.51
CFTRP13569 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC30.7■■■□□ 2.51
CFTRP13569 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC30.7■■■□□ 2.51
CFTRP13569 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC30.7■■■□□ 2.51
CFTRP13569 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC30.7■■■□□ 2.51
CFTRP13569 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.51
CFTRP13569 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CFTRP13569 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CFTRP13569 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CFTRP13569 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC30.7■■■□□ 2.51
CFTRP13569 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC30.7■■■□□ 2.51
CFTRP13569 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC30.7■■■□□ 2.5
CFTRP13569 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
CFTRP13569 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
CFTRP13569 PTMS-202ENST00000389462 773 ntTSL 2 BASIC30.7■■■□□ 2.5
CFTRP13569 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC30.7■■■□□ 2.5
CFTRP13569 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC30.7■■■□□ 2.5
CFTRP13569 PAWRP1-201ENST00000451083 565 ntBASIC30.7■■■□□ 2.5
CFTRP13569 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC30.7■■■□□ 2.5
CFTRP13569 S100A2-206ENST00000497140 697 ntTSL 2 BASIC30.7■■■□□ 2.5
CFTRP13569 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.5
CFTRP13569 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CFTRP13569 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC30.69■■■□□ 2.5
CFTRP13569 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
CFTRP13569 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CFTRP13569 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CFTRP13569 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CFTRP13569 BID-204ENST00000399767 2129 ntTSL 2 BASIC30.69■■■□□ 2.5
CFTRP13569 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC30.69■■■□□ 2.5
CFTRP13569 AC004461.1-201ENST00000412461 403 ntBASIC30.69■■■□□ 2.5
CFTRP13569 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC30.69■■■□□ 2.5
CFTRP13569 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CFTRP13569 AC019129.2-201ENST00000609837 1235 ntBASIC30.69■■■□□ 2.5
CFTRP13569 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CFTRP13569 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
CFTRP13569 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CFTRP13569 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms