Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.78■□□□□ 0.92
BMP3P12645 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.78■□□□□ 0.92
BMP3P12645 FAM197Y8-203ENST00000450145 560 ntBASIC20.78■□□□□ 0.92
BMP3P12645 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
BMP3P12645 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
BMP3P12645 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.78■□□□□ 0.92
BMP3P12645 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BMP3P12645 AL355877.3-201ENST00000622820 899 ntBASIC20.78■□□□□ 0.92
BMP3P12645 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
BMP3P12645 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
BMP3P12645 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.78■□□□□ 0.92
BMP3P12645 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BMP3P12645 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BMP3P12645 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
BMP3P12645 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BMP3P12645 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.78■□□□□ 0.92
BMP3P12645 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
BMP3P12645 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.78■□□□□ 0.92
BMP3P12645 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
BMP3P12645 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
BMP3P12645 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BMP3P12645 AL096828.2-201ENST00000567259 1965 ntBASIC20.77■□□□□ 0.92
BMP3P12645 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BMP3P12645 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BMP3P12645 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BMP3P12645 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
BMP3P12645 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BMP3P12645 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
BMP3P12645 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
BMP3P12645 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BMP3P12645 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BMP3P12645 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.77■□□□□ 0.92
BMP3P12645 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
BMP3P12645 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
BMP3P12645 RBM17P3-201ENST00000417687 1192 ntBASIC20.77■□□□□ 0.92
BMP3P12645 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.77■□□□□ 0.92
BMP3P12645 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.77■□□□□ 0.92
BMP3P12645 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
BMP3P12645 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BMP3P12645 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
BMP3P12645 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
BMP3P12645 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.77■□□□□ 0.92
BMP3P12645 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
BMP3P12645 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.77■□□□□ 0.92
BMP3P12645 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BMP3P12645 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
BMP3P12645 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
BMP3P12645 AC093677.2-201ENST00000600169 1863 ntBASIC20.77■□□□□ 0.92
BMP3P12645 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BMP3P12645 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
BMP3P12645 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
BMP3P12645 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BMP3P12645 AL138781.2-201ENST00000617896 1843 ntBASIC20.76■□□□□ 0.91
BMP3P12645 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BMP3P12645 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
BMP3P12645 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
BMP3P12645 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
BMP3P12645 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BMP3P12645 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BMP3P12645 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BMP3P12645 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.76■□□□□ 0.91
BMP3P12645 FGFR3P6-201ENST00000457012 610 ntBASIC20.76■□□□□ 0.91
BMP3P12645 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.76■□□□□ 0.91
BMP3P12645 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.76■□□□□ 0.91
BMP3P12645 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
BMP3P12645 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.76■□□□□ 0.91
BMP3P12645 MTDHP3-201ENST00000594186 672 ntBASIC20.76■□□□□ 0.91
BMP3P12645 AC064862.7-201ENST00000604520 867 ntBASIC20.76■□□□□ 0.91
BMP3P12645 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.76■□□□□ 0.91
BMP3P12645 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BMP3P12645 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
BMP3P12645 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
BMP3P12645 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BMP3P12645 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
BMP3P12645 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.76■□□□□ 0.91
BMP3P12645 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.76■□□□□ 0.91
BMP3P12645 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BMP3P12645 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
BMP3P12645 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BMP3P12645 HLA-A-201ENST00000376802 1334 ntBASIC20.76■□□□□ 0.91
BMP3P12645 AC022898.2-201ENST00000616822 1312 ntBASIC20.76■□□□□ 0.91
BMP3P12645 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BMP3P12645 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
BMP3P12645 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BMP3P12645 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BMP3P12645 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
BMP3P12645 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BMP3P12645 KRT8P47-201ENST00000604727 1398 ntBASIC20.75■□□□□ 0.91
BMP3P12645 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BMP3P12645 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BMP3P12645 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BMP3P12645 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BMP3P12645 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BMP3P12645 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
BMP3P12645 AC007967.3-201ENST00000434308 558 ntBASIC20.75■□□□□ 0.91
BMP3P12645 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.75■□□□□ 0.91
BMP3P12645 AC079776.4-201ENST00000511039 504 ntBASIC20.75■□□□□ 0.91
BMP3P12645 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.75■□□□□ 0.91
BMP3P12645 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.75■□□□□ 0.91
BMP3P12645 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms