Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BMP4P12644 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.6■□□□□ 0.25
BMP4P12644 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BMP4P12644 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BMP4P12644 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BMP4P12644 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
BMP4P12644 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
BMP4P12644 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.6■□□□□ 0.25
BMP4P12644 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
BMP4P12644 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.6■□□□□ 0.25
BMP4P12644 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
BMP4P12644 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
BMP4P12644 AC104417.2-201ENST00000562989 1793 ntBASIC16.6■□□□□ 0.25
BMP4P12644 TMPOP1-202ENST00000424642 1267 ntBASIC16.6■□□□□ 0.25
BMP4P12644 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.6■□□□□ 0.25
BMP4P12644 AC004980.1-204ENST00000429707 299 ntBASIC16.6■□□□□ 0.25
BMP4P12644 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.6■□□□□ 0.25
BMP4P12644 B3GAT3P1-201ENST00000471720 806 ntBASIC16.6■□□□□ 0.25
BMP4P12644 AC010331.1-201ENST00000611423 582 ntBASIC16.6■□□□□ 0.25
BMP4P12644 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.6■□□□□ 0.25
BMP4P12644 AC092865.7-201ENST00000641832 219 ntBASIC16.6■□□□□ 0.25
BMP4P12644 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BMP4P12644 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
BMP4P12644 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.6■□□□□ 0.25
BMP4P12644 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BMP4P12644 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
BMP4P12644 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BMP4P12644 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BMP4P12644 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BMP4P12644 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BMP4P12644 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.6■□□□□ 0.25
BMP4P12644 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BMP4P12644 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BMP4P12644 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
BMP4P12644 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BMP4P12644 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BMP4P12644 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BMP4P12644 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.6■□□□□ 0.25
BMP4P12644 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
BMP4P12644 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.59■□□□□ 0.25
BMP4P12644 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BMP4P12644 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.59■□□□□ 0.25
BMP4P12644 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
BMP4P12644 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BMP4P12644 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BMP4P12644 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BMP4P12644 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BMP4P12644 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
BMP4P12644 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.59■□□□□ 0.25
BMP4P12644 AC004951.3-201ENST00000418645 1148 ntBASIC16.59■□□□□ 0.25
BMP4P12644 LIN28AP1-201ENST00000429574 405 ntBASIC16.59■□□□□ 0.25
BMP4P12644 AC097488.1-201ENST00000507834 756 ntBASIC16.59■□□□□ 0.25
BMP4P12644 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.59■□□□□ 0.25
BMP4P12644 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BMP4P12644 AP001094.4-201ENST00000579008 2176 ntBASIC16.59■□□□□ 0.25
BMP4P12644 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
BMP4P12644 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.59■□□□□ 0.25
BMP4P12644 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BMP4P12644 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BMP4P12644 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.59■□□□□ 0.25
BMP4P12644 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.59■□□□□ 0.25
BMP4P12644 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
BMP4P12644 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.59■□□□□ 0.25
BMP4P12644 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.59■□□□□ 0.25
BMP4P12644 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BMP4P12644 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
BMP4P12644 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BMP4P12644 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BMP4P12644 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BMP4P12644 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.59■□□□□ 0.25
BMP4P12644 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BMP4P12644 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BMP4P12644 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
BMP4P12644 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.58■□□□□ 0.25
BMP4P12644 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
BMP4P12644 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BMP4P12644 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BMP4P12644 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.58■□□□□ 0.25
BMP4P12644 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BMP4P12644 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BMP4P12644 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.25
BMP4P12644 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BMP4P12644 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BMP4P12644 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
BMP4P12644 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.58■□□□□ 0.24
BMP4P12644 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.58■□□□□ 0.24
BMP4P12644 CRYGFP-201ENST00000418459 633 ntBASIC16.58■□□□□ 0.24
BMP4P12644 AL137013.1-201ENST00000432946 1228 ntBASIC16.58■□□□□ 0.24
BMP4P12644 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BMP4P12644 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.58■□□□□ 0.24
BMP4P12644 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BMP4P12644 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.58■□□□□ 0.24
BMP4P12644 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.58■□□□□ 0.24
BMP4P12644 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.58■□□□□ 0.24
BMP4P12644 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BMP4P12644 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.58■□□□□ 0.24
BMP4P12644 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
BMP4P12644 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.58■□□□□ 0.24
BMP4P12644 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BMP4P12644 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms