Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCNAP12004 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCNAP12004 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
PCNAP12004 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCNAP12004 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCNAP12004 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.63■□□□□ 0.41
PCNAP12004 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCNAP12004 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.63■□□□□ 0.41
PCNAP12004 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCNAP12004 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PCNAP12004 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.62■□□□□ 0.41
PCNAP12004 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.62■□□□□ 0.41
PCNAP12004 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.62■□□□□ 0.41
PCNAP12004 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
PCNAP12004 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCNAP12004 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.62■□□□□ 0.41
PCNAP12004 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
PCNAP12004 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.62■□□□□ 0.41
PCNAP12004 SEC1P-202ENST00000473944 940 ntBASIC17.62■□□□□ 0.41
PCNAP12004 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.62■□□□□ 0.41
PCNAP12004 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.62■□□□□ 0.41
PCNAP12004 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.62■□□□□ 0.41
PCNAP12004 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.62■□□□□ 0.41
PCNAP12004 AC141257.4-201ENST00000634557 245 ntBASIC17.62■□□□□ 0.41
PCNAP12004 AC136944.6-201ENST00000634818 245 ntBASIC17.62■□□□□ 0.41
PCNAP12004 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.62■□□□□ 0.41
PCNAP12004 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
PCNAP12004 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.62■□□□□ 0.41
PCNAP12004 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.62■□□□□ 0.41
PCNAP12004 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.62■□□□□ 0.41
PCNAP12004 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCNAP12004 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCNAP12004 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.62■□□□□ 0.41
PCNAP12004 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PCNAP12004 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCNAP12004 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCNAP12004 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.61■□□□□ 0.41
PCNAP12004 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCNAP12004 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCNAP12004 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
PCNAP12004 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.61■□□□□ 0.41
PCNAP12004 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCNAP12004 AC139713.2-201ENST00000641328 2723 ntBASIC17.61■□□□□ 0.41
PCNAP12004 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.61■□□□□ 0.41
PCNAP12004 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCNAP12004 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCNAP12004 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCNAP12004 AP000523.1-201ENST00000398242 1049 ntBASIC17.61■□□□□ 0.41
PCNAP12004 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCNAP12004 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCNAP12004 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.61■□□□□ 0.41
PCNAP12004 NEK4P2-201ENST00000580004 1012 ntBASIC17.61■□□□□ 0.41
PCNAP12004 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.61■□□□□ 0.41
PCNAP12004 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCNAP12004 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCNAP12004 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCNAP12004 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.61■□□□□ 0.41
PCNAP12004 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.61■□□□□ 0.41
PCNAP12004 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCNAP12004 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PCNAP12004 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCNAP12004 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCNAP12004 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCNAP12004 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCNAP12004 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.61■□□□□ 0.41
PCNAP12004 AC106820.2-201ENST00000563775 3264 ntBASIC17.6■□□□□ 0.41
PCNAP12004 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCNAP12004 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCNAP12004 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.6■□□□□ 0.41
PCNAP12004 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCNAP12004 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.6■□□□□ 0.41
PCNAP12004 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PCNAP12004 AC092865.7-201ENST00000641832 219 ntBASIC17.6■□□□□ 0.41
PCNAP12004 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PCNAP12004 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCNAP12004 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms