Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CLUP10909 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CLUP10909 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLUP10909 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.33■□□□□ 0.2
CLUP10909 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
CLUP10909 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.33■□□□□ 0.2
CLUP10909 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.33■□□□□ 0.2
CLUP10909 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.33■□□□□ 0.2
CLUP10909 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.33■□□□□ 0.2
CLUP10909 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.33■□□□□ 0.2
CLUP10909 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
CLUP10909 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.33■□□□□ 0.2
CLUP10909 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.33■□□□□ 0.2
CLUP10909 AL049637.2-201ENST00000641778 930 ntBASIC16.33■□□□□ 0.2
CLUP10909 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLUP10909 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLUP10909 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.33■□□□□ 0.2
CLUP10909 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLUP10909 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLUP10909 LINC01126-201ENST00000623515 1646 ntBASIC16.33■□□□□ 0.2
CLUP10909 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLUP10909 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CLUP10909 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
CLUP10909 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLUP10909 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.33■□□□□ 0.2
CLUP10909 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLUP10909 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLUP10909 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.33■□□□□ 0.2
CLUP10909 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CLUP10909 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLUP10909 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLUP10909 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLUP10909 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLUP10909 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLUP10909 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLUP10909 MIR149-201ENST00000384879 89 ntBASIC16.32■□□□□ 0.2
CLUP10909 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLUP10909 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLUP10909 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.32■□□□□ 0.2
CLUP10909 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.32■□□□□ 0.2
CLUP10909 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLUP10909 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLUP10909 AC233702.5-201ENST00000584107 538 ntBASIC16.32■□□□□ 0.2
CLUP10909 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLUP10909 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLUP10909 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLUP10909 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLUP10909 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CLUP10909 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CLUP10909 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.32■□□□□ 0.2
CLUP10909 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CLUP10909 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CLUP10909 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLUP10909 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLUP10909 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLUP10909 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.31■□□□□ 0.2
CLUP10909 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLUP10909 AL645608.8-201ENST00000606034 2086 ntBASIC16.31■□□□□ 0.2
CLUP10909 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLUP10909 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.31■□□□□ 0.2
CLUP10909 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLUP10909 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLUP10909 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CLUP10909 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.31■□□□□ 0.2
CLUP10909 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.31■□□□□ 0.2
CLUP10909 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLUP10909 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLUP10909 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CLUP10909 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CLUP10909 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLUP10909 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.31■□□□□ 0.2
CLUP10909 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLUP10909 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLUP10909 KRT18P23-201ENST00000435622 1283 ntBASIC16.31■□□□□ 0.2
CLUP10909 AL355355.2-201ENST00000442321 338 ntBASIC16.31■□□□□ 0.2
CLUP10909 GCSHP5-201ENST00000443090 522 ntBASIC16.31■□□□□ 0.2
CLUP10909 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.31■□□□□ 0.2
CLUP10909 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLUP10909 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.31■□□□□ 0.2
CLUP10909 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLUP10909 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.31■□□□□ 0.2
CLUP10909 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLUP10909 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLUP10909 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.31■□□□□ 0.2
CLUP10909 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
CLUP10909 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.31■□□□□ 0.2
CLUP10909 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLUP10909 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLUP10909 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLUP10909 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLUP10909 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLUP10909 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.31■□□□□ 0.2
CLUP10909 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLUP10909 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLUP10909 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.31■□□□□ 0.2
CLUP10909 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.3■□□□□ 0.2
CLUP10909 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.3■□□□□ 0.2
CLUP10909 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLUP10909 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.3■□□□□ 0.2
CLUP10909 AC006116.8-202ENST00000587620 1550 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms