Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 SLC25A6P4-201ENST00000586535 553 ntBASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 AC064862.7-201ENST00000604520 867 ntBASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RAB40ALP0C0E4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RAB40ALP0C0E4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB40ALP0C0E4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB40ALP0C0E4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
RAB40ALP0C0E4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB40ALP0C0E4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
RAB40ALP0C0E4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB40ALP0C0E4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.02■□□□□ 0.31
RAB40ALP0C0E4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB40ALP0C0E4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB40ALP0C0E4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB40ALP0C0E4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17■□□□□ 0.31
RAB40ALP0C0E4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17■□□□□ 0.31
RAB40ALP0C0E4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40ALP0C0E4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB40ALP0C0E4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17■□□□□ 0.31
RAB40ALP0C0E4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40ALP0C0E4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40ALP0C0E4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40ALP0C0E4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40ALP0C0E4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40ALP0C0E4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RAB40ALP0C0E4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40ALP0C0E4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40ALP0C0E4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40ALP0C0E4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40ALP0C0E4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17■□□□□ 0.31
RAB40ALP0C0E4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40ALP0C0E4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17■□□□□ 0.31
RAB40ALP0C0E4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40ALP0C0E4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40ALP0C0E4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
RAB40ALP0C0E4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17■□□□□ 0.31
RAB40ALP0C0E4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17■□□□□ 0.31
RAB40ALP0C0E4 AC096582.2-201ENST00000510860 516 ntBASIC17■□□□□ 0.31
RAB40ALP0C0E4 AF238378.1-201ENST00000526806 358 ntBASIC17■□□□□ 0.31
RAB40ALP0C0E4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
RAB40ALP0C0E4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17■□□□□ 0.31
RAB40ALP0C0E4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB40ALP0C0E4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RAB40ALP0C0E4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17■□□□□ 0.31
RAB40ALP0C0E4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40ALP0C0E4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40ALP0C0E4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40ALP0C0E4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RAB40ALP0C0E4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB40ALP0C0E4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RAB40ALP0C0E4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17■□□□□ 0.31
RAB40ALP0C0E4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB40ALP0C0E4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB40ALP0C0E4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms