Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A2P08123 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.73■□□□□ 0.75
COL1A2P08123 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.73■□□□□ 0.75
COL1A2P08123 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
COL1A2P08123 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.73■□□□□ 0.75
COL1A2P08123 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.73■□□□□ 0.75
COL1A2P08123 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
COL1A2P08123 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A2P08123 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.73■□□□□ 0.75
COL1A2P08123 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.73■□□□□ 0.75
COL1A2P08123 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.73■□□□□ 0.75
COL1A2P08123 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A2P08123 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A2P08123 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A2P08123 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A2P08123 AL356309.3-201ENST00000624132 1934 ntBASIC19.73■□□□□ 0.75
COL1A2P08123 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A2P08123 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A2P08123 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL1A2P08123 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
COL1A2P08123 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
COL1A2P08123 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
COL1A2P08123 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.72■□□□□ 0.75
COL1A2P08123 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.72■□□□□ 0.75
COL1A2P08123 SART3-203ENST00000546611 1184 ntBASIC19.72■□□□□ 0.75
COL1A2P08123 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.72■□□□□ 0.75
COL1A2P08123 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 AC120114.3-201ENST00000611923 658 ntBASIC19.72■□□□□ 0.75
COL1A2P08123 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.72■□□□□ 0.75
COL1A2P08123 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.72■□□□□ 0.75
COL1A2P08123 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.72■□□□□ 0.75
COL1A2P08123 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
COL1A2P08123 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.72■□□□□ 0.75
COL1A2P08123 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
COL1A2P08123 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.72■□□□□ 0.75
COL1A2P08123 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.72■□□□□ 0.75
COL1A2P08123 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL1A2P08123 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A2P08123 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A2P08123 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A2P08123 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A2P08123 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A2P08123 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.71■□□□□ 0.75
COL1A2P08123 AC093909.1-201ENST00000504731 1122 ntBASIC19.71■□□□□ 0.75
COL1A2P08123 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.71■□□□□ 0.75
COL1A2P08123 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.71■□□□□ 0.75
COL1A2P08123 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
COL1A2P08123 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A2P08123 MIR7706-201ENST00000613747 67 ntBASIC19.71■□□□□ 0.75
COL1A2P08123 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.71■□□□□ 0.75
COL1A2P08123 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.71■□□□□ 0.75
COL1A2P08123 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.71■□□□□ 0.75
COL1A2P08123 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
COL1A2P08123 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.71■□□□□ 0.75
COL1A2P08123 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A2P08123 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.71■□□□□ 0.75
COL1A2P08123 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A2P08123 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A2P08123 AC098818.2-201ENST00000564925 2320 ntBASIC19.71■□□□□ 0.75
COL1A2P08123 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A2P08123 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A2P08123 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A2P08123 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A2P08123 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A2P08123 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COL1A2P08123 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A2P08123 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A2P08123 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A2P08123 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A2P08123 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
COL1A2P08123 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL1A2P08123 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.71■□□□□ 0.75
COL1A2P08123 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A2P08123 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A2P08123 AL590627.1-203ENST00000421194 1026 ntBASIC19.7■□□□□ 0.74
COL1A2P08123 AC103564.2-201ENST00000432853 1299 ntBASIC19.7■□□□□ 0.74
COL1A2P08123 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.7■□□□□ 0.74
COL1A2P08123 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms