Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
PDGFAP04085 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.89■□□□□ 0.29
PDGFAP04085 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PDGFAP04085 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFAP04085 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PDGFAP04085 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFAP04085 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.88■□□□□ 0.29
PDGFAP04085 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFAP04085 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFAP04085 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFAP04085 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PDGFAP04085 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.88■□□□□ 0.29
PDGFAP04085 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFAP04085 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
PDGFAP04085 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFAP04085 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PDGFAP04085 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFAP04085 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFAP04085 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFAP04085 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PDGFAP04085 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.88■□□□□ 0.29
PDGFAP04085 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFAP04085 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFAP04085 VENTXP7-201ENST00000475503 772 ntBASIC16.88■□□□□ 0.29
PDGFAP04085 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.88■□□□□ 0.29
PDGFAP04085 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.88■□□□□ 0.29
PDGFAP04085 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.88■□□□□ 0.29
PDGFAP04085 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.88■□□□□ 0.29
PDGFAP04085 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.88■□□□□ 0.29
PDGFAP04085 BNIP3P18-201ENST00000593976 575 ntBASIC16.88■□□□□ 0.29
PDGFAP04085 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PDGFAP04085 AL773604.1-201ENST00000617417 272 ntBASIC16.88■□□□□ 0.29
PDGFAP04085 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.88■□□□□ 0.29
PDGFAP04085 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFAP04085 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFAP04085 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.88■□□□□ 0.29
PDGFAP04085 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFAP04085 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PDGFAP04085 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.88■□□□□ 0.29
PDGFAP04085 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFAP04085 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFAP04085 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.88■□□□□ 0.29
PDGFAP04085 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFAP04085 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDGFAP04085 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFAP04085 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFAP04085 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
PDGFAP04085 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.87■□□□□ 0.29
PDGFAP04085 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PDGFAP04085 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFAP04085 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFAP04085 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PDGFAP04085 AC139713.2-201ENST00000641328 2723 ntBASIC16.87■□□□□ 0.29
PDGFAP04085 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.87■□□□□ 0.29
PDGFAP04085 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.87■□□□□ 0.29
PDGFAP04085 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFAP04085 AC125437.2-201ENST00000625180 2167 ntBASIC16.87■□□□□ 0.29
PDGFAP04085 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFAP04085 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.87■□□□□ 0.29
PDGFAP04085 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFAP04085 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.87■□□□□ 0.29
PDGFAP04085 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFAP04085 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFAP04085 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFAP04085 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.87■□□□□ 0.29
PDGFAP04085 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFAP04085 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.87■□□□□ 0.29
PDGFAP04085 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFAP04085 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.87■□□□□ 0.29
PDGFAP04085 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFAP04085 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFAP04085 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFAP04085 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFAP04085 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PDGFAP04085 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFAP04085 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
PDGFAP04085 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFAP04085 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.87■□□□□ 0.29
PDGFAP04085 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFAP04085 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.86■□□□□ 0.29
PDGFAP04085 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFAP04085 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.86■□□□□ 0.29
PDGFAP04085 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFAP04085 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFAP04085 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFAP04085 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFAP04085 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
PDGFAP04085 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PDGFAP04085 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFAP04085 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.86■□□□□ 0.29
PDGFAP04085 KRT18P13-201ENST00000400056 1290 ntBASIC16.86■□□□□ 0.29
PDGFAP04085 AL031284.1-201ENST00000419297 478 ntBASIC16.86■□□□□ 0.29
PDGFAP04085 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.86■□□□□ 0.29
PDGFAP04085 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.86■□□□□ 0.29
PDGFAP04085 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.86■□□□□ 0.29
PDGFAP04085 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PDGFAP04085 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.86■□□□□ 0.29
PDGFAP04085 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms