Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFBP01127 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
PDGFBP01127 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.07■□□□□ 0.48
PDGFBP01127 AC007274.1-201ENST00000439805 662 ntBASIC18.07■□□□□ 0.48
PDGFBP01127 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.07■□□□□ 0.48
PDGFBP01127 KRT19P2-202ENST00000557173 1012 ntBASIC18.07■□□□□ 0.48
PDGFBP01127 AC093520.2-201ENST00000561830 333 ntBASIC18.07■□□□□ 0.48
PDGFBP01127 AC004835.2-201ENST00000603762 682 ntBASIC18.07■□□□□ 0.48
PDGFBP01127 AD001527.2-201ENST00000622994 785 ntBASIC18.07■□□□□ 0.48
PDGFBP01127 Z92544.3-201ENST00000624747 417 ntBASIC18.07■□□□□ 0.48
PDGFBP01127 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFBP01127 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFBP01127 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFBP01127 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFBP01127 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFBP01127 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFBP01127 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.06■□□□□ 0.48
PDGFBP01127 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
PDGFBP01127 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFBP01127 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
PDGFBP01127 LINC01006-201ENST00000333319 2292 ntBASIC18.06■□□□□ 0.48
PDGFBP01127 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PDGFBP01127 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFBP01127 AC125437.2-201ENST00000625180 2167 ntBASIC18.06■□□□□ 0.48
PDGFBP01127 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
PDGFBP01127 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFBP01127 RPS15P9-201ENST00000494093 319 ntBASIC18.06■□□□□ 0.48
PDGFBP01127 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.06■□□□□ 0.48
PDGFBP01127 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFBP01127 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.06■□□□□ 0.48
PDGFBP01127 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.06■□□□□ 0.48
PDGFBP01127 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PDGFBP01127 AC008667.4-201ENST00000607370 168 ntBASIC18.06■□□□□ 0.48
PDGFBP01127 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
PDGFBP01127 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.06■□□□□ 0.48
PDGFBP01127 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFBP01127 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PDGFBP01127 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.06■□□□□ 0.48
PDGFBP01127 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.06■□□□□ 0.48
PDGFBP01127 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFBP01127 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFBP01127 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFBP01127 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFBP01127 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDGFBP01127 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFBP01127 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFBP01127 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.05■□□□□ 0.48
PDGFBP01127 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.05■□□□□ 0.48
PDGFBP01127 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFBP01127 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.05■□□□□ 0.48
PDGFBP01127 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFBP01127 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.05■□□□□ 0.48
PDGFBP01127 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.05■□□□□ 0.48
PDGFBP01127 AC025678.2-201ENST00000562061 970 ntBASIC18.05■□□□□ 0.48
PDGFBP01127 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.05■□□□□ 0.48
PDGFBP01127 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.05■□□□□ 0.48
PDGFBP01127 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.05■□□□□ 0.48
PDGFBP01127 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PDGFBP01127 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.05■□□□□ 0.48
PDGFBP01127 AC012645.4-201ENST00000610691 1061 ntBASIC18.05■□□□□ 0.48
PDGFBP01127 AC091812.2-201ENST00000619081 385 ntBASIC18.05■□□□□ 0.48
PDGFBP01127 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFBP01127 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFBP01127 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFBP01127 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFBP01127 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFBP01127 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFBP01127 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.04■□□□□ 0.48
PDGFBP01127 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.04■□□□□ 0.48
PDGFBP01127 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFBP01127 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFBP01127 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PDGFBP01127 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.04■□□□□ 0.48
PDGFBP01127 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PDGFBP01127 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFBP01127 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFBP01127 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFBP01127 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.04■□□□□ 0.48
PDGFBP01127 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFBP01127 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PDGFBP01127 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.04■□□□□ 0.48
PDGFBP01127 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFBP01127 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFBP01127 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.04■□□□□ 0.48
PDGFBP01127 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.04■□□□□ 0.48
PDGFBP01127 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PDGFBP01127 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFBP01127 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.04■□□□□ 0.48
PDGFBP01127 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PDGFBP01127 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFBP01127 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.04■□□□□ 0.48
PDGFBP01127 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFBP01127 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PDGFBP01127 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFBP01127 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.03■□□□□ 0.48
PDGFBP01127 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.03■□□□□ 0.48
PDGFBP01127 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFBP01127 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.03■□□□□ 0.48
PDGFBP01127 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFBP01127 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms