Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX3O95343 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIX3O95343 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SIX3O95343 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX3O95343 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.67■□□□□ 0.42
SIX3O95343 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.67■□□□□ 0.42
SIX3O95343 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SIX3O95343 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIX3O95343 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.67■□□□□ 0.42
SIX3O95343 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX3O95343 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX3O95343 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIX3O95343 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX3O95343 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.67■□□□□ 0.42
SIX3O95343 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.67■□□□□ 0.42
SIX3O95343 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.67■□□□□ 0.42
SIX3O95343 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.67■□□□□ 0.42
SIX3O95343 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX3O95343 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.67■□□□□ 0.42
SIX3O95343 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX3O95343 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX3O95343 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX3O95343 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX3O95343 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX3O95343 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.67■□□□□ 0.42
SIX3O95343 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
SIX3O95343 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.67■□□□□ 0.42
SIX3O95343 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SIX3O95343 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX3O95343 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX3O95343 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIX3O95343 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIX3O95343 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.66■□□□□ 0.42
SIX3O95343 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX3O95343 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SIX3O95343 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
SIX3O95343 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SIX3O95343 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX3O95343 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIX3O95343 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX3O95343 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.66■□□□□ 0.42
SIX3O95343 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.66■□□□□ 0.42
SIX3O95343 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX3O95343 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX3O95343 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX3O95343 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.66■□□□□ 0.42
SIX3O95343 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.66■□□□□ 0.42
SIX3O95343 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.66■□□□□ 0.42
SIX3O95343 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.66■□□□□ 0.42
SIX3O95343 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX3O95343 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.66■□□□□ 0.42
SIX3O95343 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.66■□□□□ 0.42
SIX3O95343 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.66■□□□□ 0.42
SIX3O95343 MIR3917-201ENST00000580971 93 ntBASIC17.66■□□□□ 0.42
SIX3O95343 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SIX3O95343 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIX3O95343 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.66■□□□□ 0.42
SIX3O95343 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIX3O95343 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIX3O95343 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.66■□□□□ 0.42
SIX3O95343 AC139713.2-201ENST00000641328 2723 ntBASIC17.66■□□□□ 0.42
SIX3O95343 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIX3O95343 LINC01568-207ENST00000641790 1380 ntBASIC17.66■□□□□ 0.42
SIX3O95343 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX3O95343 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX3O95343 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SIX3O95343 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX3O95343 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SIX3O95343 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SIX3O95343 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.65■□□□□ 0.42
SIX3O95343 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SIX3O95343 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX3O95343 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SIX3O95343 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.65■□□□□ 0.42
SIX3O95343 NEK4P2-201ENST00000580004 1012 ntBASIC17.65■□□□□ 0.42
SIX3O95343 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.65■□□□□ 0.42
SIX3O95343 AL157888.1-201ENST00000631930 593 ntBASIC17.65■□□□□ 0.42
SIX3O95343 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
SIX3O95343 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX3O95343 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX3O95343 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX3O95343 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX3O95343 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
SIX3O95343 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
SIX3O95343 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX3O95343 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX3O95343 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.65■□□□□ 0.42
SIX3O95343 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SIX3O95343 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.65■□□□□ 0.42
SIX3O95343 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SIX3O95343 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX3O95343 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX3O95343 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SIX3O95343 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.65■□□□□ 0.42
SIX3O95343 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SIX3O95343 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX3O95343 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIX3O95343 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SIX3O95343 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.64■□□□□ 0.42
SIX3O95343 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms