Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT1O95170 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.14■□□□□ 0.17
CDRT1O95170 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.14■□□□□ 0.17
CDRT1O95170 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT1O95170 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDRT1O95170 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT1O95170 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT1O95170 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT1O95170 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT1O95170 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.14■□□□□ 0.17
CDRT1O95170 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT1O95170 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.14■□□□□ 0.17
CDRT1O95170 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.14■□□□□ 0.17
CDRT1O95170 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT1O95170 AC090192.1-201ENST00000517740 490 ntBASIC16.14■□□□□ 0.17
CDRT1O95170 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT1O95170 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT1O95170 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.14■□□□□ 0.17
CDRT1O95170 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.14■□□□□ 0.17
CDRT1O95170 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.14■□□□□ 0.17
CDRT1O95170 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.14■□□□□ 0.17
CDRT1O95170 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT1O95170 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.14■□□□□ 0.17
CDRT1O95170 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.14■□□□□ 0.17
CDRT1O95170 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.14■□□□□ 0.17
CDRT1O95170 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT1O95170 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT1O95170 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.14■□□□□ 0.17
CDRT1O95170 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT1O95170 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT1O95170 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT1O95170 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDRT1O95170 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.13■□□□□ 0.17
CDRT1O95170 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT1O95170 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT1O95170 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT1O95170 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDRT1O95170 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDRT1O95170 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDRT1O95170 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT1O95170 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.13■□□□□ 0.17
CDRT1O95170 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.13■□□□□ 0.17
CDRT1O95170 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDRT1O95170 RNA5SP413-201ENST00000516373 109 ntBASIC16.13■□□□□ 0.17
CDRT1O95170 AP003097.1-201ENST00000530657 1135 ntBASIC16.13■□□□□ 0.17
CDRT1O95170 AC233263.1-201ENST00000578059 224 ntBASIC16.13■□□□□ 0.17
CDRT1O95170 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT1O95170 MTDHP1-201ENST00000605323 784 ntBASIC16.13■□□□□ 0.17
CDRT1O95170 AC069544.1-201ENST00000609399 999 ntBASIC16.13■□□□□ 0.17
CDRT1O95170 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.13■□□□□ 0.17
CDRT1O95170 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT1O95170 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT1O95170 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.13■□□□□ 0.17
CDRT1O95170 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT1O95170 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT1O95170 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT1O95170 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.13■□□□□ 0.17
CDRT1O95170 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT1O95170 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT1O95170 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT1O95170 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.13■□□□□ 0.17
CDRT1O95170 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT1O95170 HTR7P1-201ENST00000538670 1336 ntBASIC16.13■□□□□ 0.17
CDRT1O95170 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT1O95170 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT1O95170 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.13■□□□□ 0.17
CDRT1O95170 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT1O95170 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
CDRT1O95170 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.12■□□□□ 0.17
CDRT1O95170 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDRT1O95170 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDRT1O95170 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT1O95170 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT1O95170 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT1O95170 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT1O95170 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT1O95170 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.12■□□□□ 0.17
CDRT1O95170 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT1O95170 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CDRT1O95170 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT1O95170 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT1O95170 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.12■□□□□ 0.17
CDRT1O95170 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT1O95170 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT1O95170 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.12■□□□□ 0.17
CDRT1O95170 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT1O95170 KRT17P3-201ENST00000420566 1262 ntBASIC16.12■□□□□ 0.17
CDRT1O95170 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.12■□□□□ 0.17
CDRT1O95170 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.12■□□□□ 0.17
CDRT1O95170 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT1O95170 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.12■□□□□ 0.17
CDRT1O95170 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.12■□□□□ 0.17
CDRT1O95170 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDRT1O95170 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.12■□□□□ 0.17
CDRT1O95170 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
CDRT1O95170 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.12■□□□□ 0.17
CDRT1O95170 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT1O95170 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT1O95170 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT1O95170 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms