Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LTN1O94822 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LTN1O94822 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LTN1O94822 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC23.8■■□□□ 1.4
LTN1O94822 TCAP-202ENST00000578283 583 ntTSL 5 BASIC23.8■■□□□ 1.4
LTN1O94822 AL139424.1-201ENST00000607572 797 ntBASIC23.8■■□□□ 1.4
LTN1O94822 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LTN1O94822 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LTN1O94822 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LTN1O94822 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LTN1O94822 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LTN1O94822 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LTN1O94822 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
LTN1O94822 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LTN1O94822 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC23.79■■□□□ 1.4
LTN1O94822 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
LTN1O94822 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LTN1O94822 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
LTN1O94822 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LTN1O94822 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC23.79■■□□□ 1.4
LTN1O94822 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LTN1O94822 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LTN1O94822 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LTN1O94822 FUT8-AS1-201ENST00000621019 1521 ntBASIC23.79■■□□□ 1.4
LTN1O94822 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
LTN1O94822 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LTN1O94822 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
LTN1O94822 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LTN1O94822 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC23.78■■□□□ 1.4
LTN1O94822 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
LTN1O94822 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC23.78■■□□□ 1.4
LTN1O94822 AC073592.5-201ENST00000624854 528 ntBASIC23.78■■□□□ 1.4
LTN1O94822 PGM5P2-202ENST00000637225 1043 ntBASIC23.78■■□□□ 1.4
LTN1O94822 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LTN1O94822 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC23.78■■□□□ 1.4
LTN1O94822 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC23.78■■□□□ 1.4
LTN1O94822 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LTN1O94822 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
LTN1O94822 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
LTN1O94822 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LTN1O94822 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LTN1O94822 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC23.78■■□□□ 1.4
LTN1O94822 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LTN1O94822 RPS8P6-201ENST00000426177 609 ntBASIC23.78■■□□□ 1.4
LTN1O94822 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC23.78■■□□□ 1.4
LTN1O94822 AC018845.2-201ENST00000568326 409 ntBASIC23.78■■□□□ 1.4
LTN1O94822 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC23.78■■□□□ 1.4
LTN1O94822 AC019129.2-201ENST00000609837 1235 ntBASIC23.78■■□□□ 1.4
LTN1O94822 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC23.78■■□□□ 1.4
LTN1O94822 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LTN1O94822 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
LTN1O94822 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LTN1O94822 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LTN1O94822 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LTN1O94822 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LTN1O94822 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
LTN1O94822 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC23.77■■□□□ 1.4
LTN1O94822 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LTN1O94822 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LTN1O94822 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LTN1O94822 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC23.77■■□□□ 1.4
LTN1O94822 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LTN1O94822 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LTN1O94822 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC23.77■■□□□ 1.4
LTN1O94822 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC23.77■■□□□ 1.4
LTN1O94822 RIN3-211ENST00000557762 517 ntTSL 3 BASIC23.77■■□□□ 1.4
LTN1O94822 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC23.77■■□□□ 1.4
LTN1O94822 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC23.77■■□□□ 1.4
LTN1O94822 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC23.77■■□□□ 1.4
LTN1O94822 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC23.77■■□□□ 1.4
LTN1O94822 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC23.77■■□□□ 1.4
LTN1O94822 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LTN1O94822 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LTN1O94822 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
LTN1O94822 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.77■■□□□ 1.4
LTN1O94822 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LTN1O94822 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LTN1O94822 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LTN1O94822 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.76■■□□□ 1.39
LTN1O94822 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LTN1O94822 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
LTN1O94822 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LTN1O94822 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC23.76■■□□□ 1.39
LTN1O94822 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC23.76■■□□□ 1.39
LTN1O94822 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC23.76■■□□□ 1.39
LTN1O94822 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC23.76■■□□□ 1.39
LTN1O94822 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC23.76■■□□□ 1.39
LTN1O94822 AC006504.4-201ENST00000592118 1568 ntBASIC23.76■■□□□ 1.39
LTN1O94822 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
LTN1O94822 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LTN1O94822 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LTN1O94822 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC23.76■■□□□ 1.39
LTN1O94822 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC23.76■■□□□ 1.39
LTN1O94822 HNRNPA1P28-201ENST00000424481 961 ntBASIC23.75■■□□□ 1.39
LTN1O94822 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC23.75■■□□□ 1.39
LTN1O94822 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
LTN1O94822 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC23.75■■□□□ 1.39
LTN1O94822 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC23.75■■□□□ 1.39
LTN1O94822 COX5A-202ENST00000562233 441 ntTSL 3 BASIC23.75■■□□□ 1.39
LTN1O94822 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms