Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CLPXO76031 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.43■□□□□ 0.22
CLPXO76031 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLPXO76031 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLPXO76031 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.43■□□□□ 0.22
CLPXO76031 AGGF1P2-201ENST00000426656 2106 ntBASIC16.43■□□□□ 0.22
CLPXO76031 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLPXO76031 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLPXO76031 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLPXO76031 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.43■□□□□ 0.22
CLPXO76031 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLPXO76031 FER1L4-210ENST00000615531 5998 ntBASIC16.43■□□□□ 0.22
CLPXO76031 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLPXO76031 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLPXO76031 LINC02199-201ENST00000506655 2702 ntBASIC16.43■□□□□ 0.22
CLPXO76031 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLPXO76031 AC106886.4-201ENST00000623557 2502 ntBASIC16.43■□□□□ 0.22
CLPXO76031 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLPXO76031 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLPXO76031 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.43■□□□□ 0.22
CLPXO76031 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLPXO76031 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLPXO76031 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.43■□□□□ 0.22
CLPXO76031 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.43■□□□□ 0.22
CLPXO76031 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.43■□□□□ 0.22
CLPXO76031 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.43■□□□□ 0.22
CLPXO76031 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLPXO76031 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.43■□□□□ 0.22
CLPXO76031 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLPXO76031 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLPXO76031 HLA-B-256ENST00000639848 1089 ntBASIC16.43■□□□□ 0.22
CLPXO76031 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.43■□□□□ 0.22
CLPXO76031 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CLPXO76031 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLPXO76031 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLPXO76031 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.43■□□□□ 0.22
CLPXO76031 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.43■□□□□ 0.22
CLPXO76031 AC112777.1-201ENST00000540175 1423 ntBASIC16.43■□□□□ 0.22
CLPXO76031 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CLPXO76031 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.43■□□□□ 0.22
CLPXO76031 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.43■□□□□ 0.22
CLPXO76031 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CLPXO76031 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CLPXO76031 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLPXO76031 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.42■□□□□ 0.22
CLPXO76031 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.42■□□□□ 0.22
CLPXO76031 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLPXO76031 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.42■□□□□ 0.22
CLPXO76031 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CLPXO76031 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLPXO76031 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CLPXO76031 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLPXO76031 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLPXO76031 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLPXO76031 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLPXO76031 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
CLPXO76031 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLPXO76031 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLPXO76031 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLPXO76031 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLPXO76031 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLPXO76031 GCSHP5-201ENST00000443090 522 ntBASIC16.42■□□□□ 0.22
CLPXO76031 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.42■□□□□ 0.22
CLPXO76031 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.42■□□□□ 0.22
CLPXO76031 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
CLPXO76031 AC098590.1-201ENST00000468126 897 ntBASIC16.42■□□□□ 0.22
CLPXO76031 RPS2P52-201ENST00000469610 820 ntBASIC16.42■□□□□ 0.22
CLPXO76031 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.42■□□□□ 0.22
CLPXO76031 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.42■□□□□ 0.22
CLPXO76031 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.42■□□□□ 0.22
CLPXO76031 AC060766.5-201ENST00000590539 871 ntBASIC16.42■□□□□ 0.22
CLPXO76031 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.42■□□□□ 0.22
CLPXO76031 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.42■□□□□ 0.22
CLPXO76031 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CLPXO76031 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLPXO76031 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLPXO76031 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.42■□□□□ 0.22
CLPXO76031 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.42■□□□□ 0.22
CLPXO76031 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.42■□□□□ 0.22
CLPXO76031 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLPXO76031 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLPXO76031 AC092368.3-202ENST00000574180 1591 ntBASIC16.42■□□□□ 0.22
CLPXO76031 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLPXO76031 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CLPXO76031 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLPXO76031 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CLPXO76031 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPXO76031 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPXO76031 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLPXO76031 LINC00554-201ENST00000564841 3011 ntBASIC16.41■□□□□ 0.22
CLPXO76031 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPXO76031 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPXO76031 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPXO76031 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPXO76031 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.41■□□□□ 0.22
CLPXO76031 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.41■□□□□ 0.22
CLPXO76031 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPXO76031 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.41■□□□□ 0.22
CLPXO76031 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.41■□□□□ 0.22
CLPXO76031 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms