Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 KRT18P16-201ENST00000510337 1294 ntBASIC15.75■□□□□ 0.11
UPK1BO75841 AP001330.3-201ENST00000520123 633 ntBASIC15.75■□□□□ 0.11
UPK1BO75841 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1BO75841 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.75■□□□□ 0.11
UPK1BO75841 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1BO75841 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.75■□□□□ 0.11
UPK1BO75841 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.75■□□□□ 0.11
UPK1BO75841 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1BO75841 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1BO75841 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1BO75841 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.75■□□□□ 0.11
UPK1BO75841 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1BO75841 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1BO75841 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1BO75841 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1BO75841 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.75■□□□□ 0.11
UPK1BO75841 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.75■□□□□ 0.11
UPK1BO75841 AC092068.3-201ENST00000587894 2016 ntBASIC15.75■□□□□ 0.11
UPK1BO75841 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1BO75841 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1BO75841 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1BO75841 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.75■□□□□ 0.11
UPK1BO75841 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1BO75841 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
UPK1BO75841 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
UPK1BO75841 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.75■□□□□ 0.11
UPK1BO75841 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC15.75■□□□□ 0.11
UPK1BO75841 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
UPK1BO75841 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1BO75841 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1BO75841 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.74■□□□□ 0.11
UPK1BO75841 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1BO75841 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.74■□□□□ 0.11
UPK1BO75841 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.74■□□□□ 0.11
UPK1BO75841 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1BO75841 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1BO75841 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.74■□□□□ 0.11
UPK1BO75841 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.74■□□□□ 0.11
UPK1BO75841 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1BO75841 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.74■□□□□ 0.11
UPK1BO75841 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.74■□□□□ 0.11
UPK1BO75841 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
UPK1BO75841 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.74■□□□□ 0.11
UPK1BO75841 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.74■□□□□ 0.11
UPK1BO75841 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1BO75841 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1BO75841 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.74■□□□□ 0.11
UPK1BO75841 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
UPK1BO75841 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.74■□□□□ 0.11
UPK1BO75841 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1BO75841 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
UPK1BO75841 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1BO75841 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.74■□□□□ 0.11
UPK1BO75841 KRT18P41-201ENST00000518924 1277 ntBASIC15.74■□□□□ 0.11
UPK1BO75841 TERF1P2-201ENST00000583350 1212 ntBASIC15.74■□□□□ 0.11
UPK1BO75841 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1BO75841 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1BO75841 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.74■□□□□ 0.11
UPK1BO75841 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1BO75841 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
UPK1BO75841 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1BO75841 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1BO75841 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1BO75841 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1BO75841 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1BO75841 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.74■□□□□ 0.11
UPK1BO75841 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.74■□□□□ 0.11
UPK1BO75841 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1BO75841 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.74■□□□□ 0.11
UPK1BO75841 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.74■□□□□ 0.11
UPK1BO75841 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
UPK1BO75841 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
UPK1BO75841 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.73■□□□□ 0.11
UPK1BO75841 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.73■□□□□ 0.11
UPK1BO75841 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.73■□□□□ 0.11
UPK1BO75841 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.73■□□□□ 0.11
UPK1BO75841 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.73■□□□□ 0.11
UPK1BO75841 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UPK1BO75841 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
UPK1BO75841 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UPK1BO75841 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.73■□□□□ 0.11
UPK1BO75841 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
UPK1BO75841 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
UPK1BO75841 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
UPK1BO75841 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
UPK1BO75841 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UPK1BO75841 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
UPK1BO75841 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.73■□□□□ 0.11
UPK1BO75841 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.73■□□□□ 0.11
UPK1BO75841 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC15.73■□□□□ 0.11
UPK1BO75841 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
UPK1BO75841 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UPK1BO75841 AC010536.3-201ENST00000620306 533 ntBASIC15.73■□□□□ 0.11
UPK1BO75841 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UPK1BO75841 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UPK1BO75841 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
UPK1BO75841 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
UPK1BO75841 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UPK1BO75841 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
UPK1BO75841 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms