Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH4O75427 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.81■□□□□ 0.6
LRCH4O75427 HBZP1-201ENST00000354915 429 ntBASIC18.81■□□□□ 0.6
LRCH4O75427 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH4O75427 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.81■□□□□ 0.6
LRCH4O75427 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LRCH4O75427 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.81■□□□□ 0.6
LRCH4O75427 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH4O75427 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.81■□□□□ 0.6
LRCH4O75427 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.81■□□□□ 0.6
LRCH4O75427 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.81■□□□□ 0.6
LRCH4O75427 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.81■□□□□ 0.6
LRCH4O75427 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH4O75427 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH4O75427 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH4O75427 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH4O75427 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
LRCH4O75427 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH4O75427 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.81■□□□□ 0.6
LRCH4O75427 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH4O75427 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.81■□□□□ 0.6
LRCH4O75427 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH4O75427 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRCH4O75427 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.81■□□□□ 0.6
LRCH4O75427 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH4O75427 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.8■□□□□ 0.6
LRCH4O75427 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH4O75427 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH4O75427 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.8■□□□□ 0.6
LRCH4O75427 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LRCH4O75427 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.8■□□□□ 0.6
LRCH4O75427 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.8■□□□□ 0.6
LRCH4O75427 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH4O75427 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH4O75427 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH4O75427 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH4O75427 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH4O75427 FAM8A6P-201ENST00000407496 1135 ntBASIC18.8■□□□□ 0.6
LRCH4O75427 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.8■□□□□ 0.6
LRCH4O75427 KRT18P48-201ENST00000434763 852 ntBASIC18.8■□□□□ 0.6
LRCH4O75427 FAM210CP-201ENST00000445714 574 ntBASIC18.8■□□□□ 0.6
LRCH4O75427 AC112907.2-201ENST00000448639 330 ntBASIC18.8■□□□□ 0.6
LRCH4O75427 AC063952.2-201ENST00000498792 1227 ntBASIC18.8■□□□□ 0.6
LRCH4O75427 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.8■□□□□ 0.6
LRCH4O75427 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH4O75427 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH4O75427 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH4O75427 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH4O75427 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LRCH4O75427 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.8■□□□□ 0.6
LRCH4O75427 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LRCH4O75427 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LRCH4O75427 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH4O75427 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
LRCH4O75427 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH4O75427 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH4O75427 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH4O75427 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.8■□□□□ 0.6
LRCH4O75427 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH4O75427 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.8■□□□□ 0.6
LRCH4O75427 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRCH4O75427 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
LRCH4O75427 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH4O75427 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH4O75427 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH4O75427 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LRCH4O75427 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
LRCH4O75427 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH4O75427 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH4O75427 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH4O75427 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH4O75427 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH4O75427 MIR662-201ENST00000384847 95 ntBASIC18.79■□□□□ 0.6
LRCH4O75427 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.79■□□□□ 0.6
LRCH4O75427 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LRCH4O75427 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH4O75427 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.79■□□□□ 0.6
LRCH4O75427 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.79■□□□□ 0.6
LRCH4O75427 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.79■□□□□ 0.6
LRCH4O75427 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
LRCH4O75427 AC004263.2-201ENST00000617183 678 ntBASIC18.79■□□□□ 0.6
LRCH4O75427 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH4O75427 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH4O75427 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH4O75427 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.79■□□□□ 0.6
LRCH4O75427 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH4O75427 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.79■□□□□ 0.6
LRCH4O75427 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH4O75427 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH4O75427 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH4O75427 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.79■□□□□ 0.6
LRCH4O75427 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH4O75427 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH4O75427 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.78■□□□□ 0.6
LRCH4O75427 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRCH4O75427 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LRCH4O75427 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LRCH4O75427 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LRCH4O75427 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.78■□□□□ 0.6
LRCH4O75427 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms