Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF40O75150 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.52■□□□□ 0.71
RNF40O75150 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RNF40O75150 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RNF40O75150 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
RNF40O75150 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RNF40O75150 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.52■□□□□ 0.71
RNF40O75150 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF40O75150 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.51■□□□□ 0.71
RNF40O75150 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF40O75150 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF40O75150 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
RNF40O75150 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
RNF40O75150 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF40O75150 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RNF40O75150 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RNF40O75150 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RNF40O75150 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF40O75150 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF40O75150 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF40O75150 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF40O75150 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.51■□□□□ 0.71
RNF40O75150 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF40O75150 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF40O75150 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF40O75150 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF40O75150 AC141586.5-201ENST00000624546 2050 ntBASIC19.51■□□□□ 0.71
RNF40O75150 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF40O75150 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF40O75150 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF40O75150 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF40O75150 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF40O75150 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF40O75150 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF40O75150 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RNF40O75150 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF40O75150 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RNF40O75150 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF40O75150 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF40O75150 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF40O75150 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF40O75150 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF40O75150 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF40O75150 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF40O75150 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF40O75150 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF40O75150 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RNF40O75150 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.5■□□□□ 0.71
RNF40O75150 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF40O75150 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF40O75150 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF40O75150 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RNF40O75150 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF40O75150 AC083906.6-201ENST00000641366 219 ntBASIC19.5■□□□□ 0.71
RNF40O75150 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF40O75150 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF40O75150 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF40O75150 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF40O75150 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF40O75150 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.5■□□□□ 0.71
RNF40O75150 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF40O75150 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF40O75150 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF40O75150 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF40O75150 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF40O75150 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF40O75150 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF40O75150 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
RNF40O75150 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.49■□□□□ 0.71
RNF40O75150 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.49■□□□□ 0.71
RNF40O75150 AC116407.4-201ENST00000623319 1061 ntBASIC19.49■□□□□ 0.71
RNF40O75150 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF40O75150 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF40O75150 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF40O75150 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF40O75150 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF40O75150 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF40O75150 KRT8P11-201ENST00000409686 1436 ntBASIC19.49■□□□□ 0.71
RNF40O75150 SDHAP1-207ENST00000440850 2000 ntBASIC19.49■□□□□ 0.71
RNF40O75150 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF40O75150 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF40O75150 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
RNF40O75150 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
RNF40O75150 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF40O75150 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.48■□□□□ 0.71
RNF40O75150 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF40O75150 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF40O75150 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
RNF40O75150 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF40O75150 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF40O75150 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF40O75150 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RNF40O75150 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RNF40O75150 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF40O75150 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF40O75150 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF40O75150 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF40O75150 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF40O75150 AP000523.1-201ENST00000398242 1049 ntBASIC19.48■□□□□ 0.71
RNF40O75150 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms