Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PFDN1O60925 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PFDN1O60925 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PFDN1O60925 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PFDN1O60925 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PFDN1O60925 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.16■□□□□ 0.18
PFDN1O60925 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.16■□□□□ 0.18
PFDN1O60925 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PFDN1O60925 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PFDN1O60925 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.16■□□□□ 0.18
PFDN1O60925 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.16■□□□□ 0.18
PFDN1O60925 AC010525.1-201ENST00000585559 441 ntBASIC16.16■□□□□ 0.18
PFDN1O60925 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.16■□□□□ 0.18
PFDN1O60925 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.16■□□□□ 0.18
PFDN1O60925 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.16■□□□□ 0.18
PFDN1O60925 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PFDN1O60925 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PFDN1O60925 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.16■□□□□ 0.18
PFDN1O60925 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PFDN1O60925 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PFDN1O60925 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.16■□□□□ 0.18
PFDN1O60925 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PFDN1O60925 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PFDN1O60925 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PFDN1O60925 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.16■□□□□ 0.18
PFDN1O60925 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PFDN1O60925 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
PFDN1O60925 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PFDN1O60925 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.15■□□□□ 0.18
PFDN1O60925 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.15■□□□□ 0.18
PFDN1O60925 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.15■□□□□ 0.18
PFDN1O60925 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.15■□□□□ 0.18
PFDN1O60925 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 ZNF815P-204ENST00000434898 1737 ntBASIC16.15■□□□□ 0.18
PFDN1O60925 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.15■□□□□ 0.18
PFDN1O60925 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.15■□□□□ 0.18
PFDN1O60925 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.15■□□□□ 0.18
PFDN1O60925 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.15■□□□□ 0.18
PFDN1O60925 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.15■□□□□ 0.18
PFDN1O60925 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.15■□□□□ 0.18
PFDN1O60925 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.15■□□□□ 0.18
PFDN1O60925 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.15■□□□□ 0.18
PFDN1O60925 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PFDN1O60925 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.15■□□□□ 0.18
PFDN1O60925 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PFDN1O60925 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.15■□□□□ 0.18
PFDN1O60925 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
PFDN1O60925 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.14■□□□□ 0.18
PFDN1O60925 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PFDN1O60925 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PFDN1O60925 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
PFDN1O60925 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PFDN1O60925 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PFDN1O60925 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PFDN1O60925 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PFDN1O60925 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PFDN1O60925 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.14■□□□□ 0.17
PFDN1O60925 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PFDN1O60925 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PFDN1O60925 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.14■□□□□ 0.17
PFDN1O60925 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.14■□□□□ 0.17
PFDN1O60925 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.14■□□□□ 0.17
PFDN1O60925 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PFDN1O60925 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PFDN1O60925 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PFDN1O60925 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
PFDN1O60925 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PFDN1O60925 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.14■□□□□ 0.17
PFDN1O60925 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PFDN1O60925 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.14■□□□□ 0.17
PFDN1O60925 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PFDN1O60925 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PFDN1O60925 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PFDN1O60925 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.14■□□□□ 0.17
PFDN1O60925 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PFDN1O60925 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.14■□□□□ 0.17
PFDN1O60925 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.14■□□□□ 0.17
PFDN1O60925 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PFDN1O60925 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms