Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GMDSO60547 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GMDSO60547 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GMDSO60547 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GMDSO60547 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.02■□□□□ 0.16
GMDSO60547 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GMDSO60547 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.02■□□□□ 0.16
GMDSO60547 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GMDSO60547 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.02■□□□□ 0.16
GMDSO60547 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.02■□□□□ 0.16
GMDSO60547 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
GMDSO60547 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GMDSO60547 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.02■□□□□ 0.16
GMDSO60547 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GMDSO60547 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.02■□□□□ 0.16
GMDSO60547 AC008622.2-201ENST00000617006 1229 ntBASIC16.02■□□□□ 0.16
GMDSO60547 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GMDSO60547 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.02■□□□□ 0.16
GMDSO60547 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
GMDSO60547 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
GMDSO60547 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GMDSO60547 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GMDSO60547 AC008556.1-201ENST00000610908 2040 ntBASIC16.02■□□□□ 0.15
GMDSO60547 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
GMDSO60547 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GMDSO60547 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.02■□□□□ 0.15
GMDSO60547 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.02■□□□□ 0.15
GMDSO60547 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
GMDSO60547 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
GMDSO60547 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.02■□□□□ 0.15
GMDSO60547 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
GMDSO60547 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GMDSO60547 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.01■□□□□ 0.15
GMDSO60547 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GMDSO60547 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GMDSO60547 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
GMDSO60547 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.01■□□□□ 0.15
GMDSO60547 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
GMDSO60547 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
GMDSO60547 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GMDSO60547 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GMDSO60547 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
GMDSO60547 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
GMDSO60547 TSPY14P-201ENST00000303979 915 ntBASIC16.01■□□□□ 0.15
GMDSO60547 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GMDSO60547 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
GMDSO60547 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GMDSO60547 AL390955.1-201ENST00000428694 934 ntBASIC16.01■□□□□ 0.15
GMDSO60547 AC128688.1-201ENST00000487626 519 ntBASIC16.01■□□□□ 0.15
GMDSO60547 EGLN1P1-201ENST00000531623 762 ntBASIC16.01■□□□□ 0.15
GMDSO60547 BX088651.1-201ENST00000540551 451 ntBASIC16.01■□□□□ 0.15
GMDSO60547 NAPSB-206ENST00000562112 1266 ntBASIC16.01■□□□□ 0.15
GMDSO60547 AL353719.1-201ENST00000566847 864 ntBASIC16.01■□□□□ 0.15
GMDSO60547 AL023803.3-201ENST00000615559 522 ntBASIC16.01■□□□□ 0.15
GMDSO60547 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.01■□□□□ 0.15
GMDSO60547 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.01■□□□□ 0.15
GMDSO60547 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GMDSO60547 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.01■□□□□ 0.15
GMDSO60547 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.01■□□□□ 0.15
GMDSO60547 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GMDSO60547 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.01■□□□□ 0.15
GMDSO60547 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.01■□□□□ 0.15
GMDSO60547 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
GMDSO60547 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
GMDSO60547 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GMDSO60547 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GMDSO60547 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.01■□□□□ 0.15
GMDSO60547 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GMDSO60547 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.01■□□□□ 0.15
GMDSO60547 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GMDSO60547 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GMDSO60547 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GMDSO60547 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.01■□□□□ 0.15
GMDSO60547 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16■□□□□ 0.15
GMDSO60547 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16■□□□□ 0.15
GMDSO60547 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16■□□□□ 0.15
GMDSO60547 AC108860.2-201ENST00000562760 2183 ntBASIC16■□□□□ 0.15
GMDSO60547 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
GMDSO60547 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
GMDSO60547 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GMDSO60547 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16■□□□□ 0.15
GMDSO60547 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GMDSO60547 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16■□□□□ 0.15
GMDSO60547 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16■□□□□ 0.15
GMDSO60547 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16■□□□□ 0.15
GMDSO60547 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
GMDSO60547 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GMDSO60547 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16■□□□□ 0.15
GMDSO60547 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16■□□□□ 0.15
GMDSO60547 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
GMDSO60547 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
GMDSO60547 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16■□□□□ 0.15
GMDSO60547 SLC25A6P5-201ENST00000435663 894 ntBASIC16■□□□□ 0.15
GMDSO60547 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16■□□□□ 0.15
GMDSO60547 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16■□□□□ 0.15
GMDSO60547 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16■□□□□ 0.15
GMDSO60547 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16■□□□□ 0.15
GMDSO60547 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
GMDSO60547 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16■□□□□ 0.15
GMDSO60547 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms