Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZIC3O60481 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZIC3O60481 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZIC3O60481 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZIC3O60481 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZIC3O60481 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
ZIC3O60481 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.23■□□□□ 0.19
ZIC3O60481 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ZIC3O60481 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZIC3O60481 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
ZIC3O60481 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.23■□□□□ 0.19
ZIC3O60481 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.23■□□□□ 0.19
ZIC3O60481 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZIC3O60481 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.23■□□□□ 0.19
ZIC3O60481 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.23■□□□□ 0.19
ZIC3O60481 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.23■□□□□ 0.19
ZIC3O60481 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ZIC3O60481 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZIC3O60481 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ZIC3O60481 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.23■□□□□ 0.19
ZIC3O60481 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZIC3O60481 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.23■□□□□ 0.19
ZIC3O60481 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.23■□□□□ 0.19
ZIC3O60481 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
ZIC3O60481 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.23■□□□□ 0.19
ZIC3O60481 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZIC3O60481 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.23■□□□□ 0.19
ZIC3O60481 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
ZIC3O60481 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZIC3O60481 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZIC3O60481 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.22■□□□□ 0.19
ZIC3O60481 AP000997.3-201ENST00000623333 2250 ntBASIC16.22■□□□□ 0.19
ZIC3O60481 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZIC3O60481 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.22■□□□□ 0.19
ZIC3O60481 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.22■□□□□ 0.19
ZIC3O60481 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ZIC3O60481 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.22■□□□□ 0.19
ZIC3O60481 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZIC3O60481 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.22■□□□□ 0.19
ZIC3O60481 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZIC3O60481 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZIC3O60481 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ZIC3O60481 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZIC3O60481 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZIC3O60481 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ZIC3O60481 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZIC3O60481 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZIC3O60481 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.22■□□□□ 0.19
ZIC3O60481 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.22■□□□□ 0.19
ZIC3O60481 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.22■□□□□ 0.19
ZIC3O60481 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.22■□□□□ 0.19
ZIC3O60481 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.22■□□□□ 0.19
ZIC3O60481 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.22■□□□□ 0.19
ZIC3O60481 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.22■□□□□ 0.19
ZIC3O60481 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.22■□□□□ 0.19
ZIC3O60481 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZIC3O60481 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZIC3O60481 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.22■□□□□ 0.19
ZIC3O60481 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
ZIC3O60481 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZIC3O60481 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZIC3O60481 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZIC3O60481 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZIC3O60481 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZIC3O60481 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZIC3O60481 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ZIC3O60481 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZIC3O60481 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZIC3O60481 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZIC3O60481 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZIC3O60481 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
ZIC3O60481 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZIC3O60481 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZIC3O60481 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZIC3O60481 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZIC3O60481 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZIC3O60481 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZIC3O60481 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
ZIC3O60481 AL354751.1-201ENST00000412768 1863 ntBASIC16.21■□□□□ 0.19
ZIC3O60481 RNF165-205ENST00000588679 2904 ntBASIC16.21■□□□□ 0.19
ZIC3O60481 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZIC3O60481 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZIC3O60481 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZIC3O60481 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZIC3O60481 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.21■□□□□ 0.19
ZIC3O60481 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZIC3O60481 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZIC3O60481 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZIC3O60481 MINOS1P3-201ENST00000457048 203 ntBASIC16.21■□□□□ 0.19
ZIC3O60481 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.21■□□□□ 0.19
ZIC3O60481 PRELID1P1-202ENST00000567272 903 ntBASIC16.21■□□□□ 0.19
ZIC3O60481 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.21■□□□□ 0.19
ZIC3O60481 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.21■□□□□ 0.19
ZIC3O60481 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.21■□□□□ 0.19
ZIC3O60481 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZIC3O60481 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
ZIC3O60481 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZIC3O60481 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZIC3O60481 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ZIC3O60481 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms