Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDHGA12O60330 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA12O60330 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PCDHGA12O60330 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA12O60330 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGA12O60330 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA12O60330 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA12O60330 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA12O60330 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA12O60330 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA12O60330 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCDHGA12O60330 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA12O60330 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA12O60330 KRT8P50-201ENST00000562022 1438 ntBASIC17.9■□□□□ 0.46
PCDHGA12O60330 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA12O60330 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHGA12O60330 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PCDHGA12O60330 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA12O60330 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.9■□□□□ 0.46
PCDHGA12O60330 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA12O60330 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA12O60330 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA12O60330 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA12O60330 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA12O60330 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA12O60330 AL031284.1-201ENST00000419297 478 ntBASIC17.9■□□□□ 0.46
PCDHGA12O60330 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHGA12O60330 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.9■□□□□ 0.46
PCDHGA12O60330 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCDHGA12O60330 AC114341.1-201ENST00000618070 349 ntBASIC17.9■□□□□ 0.46
PCDHGA12O60330 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.9■□□□□ 0.46
PCDHGA12O60330 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHGA12O60330 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCDHGA12O60330 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA12O60330 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCDHGA12O60330 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHGA12O60330 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA12O60330 AL161938.1-201ENST00000569833 2180 ntBASIC17.9■□□□□ 0.46
PCDHGA12O60330 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA12O60330 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHGA12O60330 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA12O60330 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PCDHGA12O60330 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA12O60330 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA12O60330 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA12O60330 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA12O60330 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA12O60330 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGA12O60330 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA12O60330 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGA12O60330 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA12O60330 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGA12O60330 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGA12O60330 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PCDHGA12O60330 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA12O60330 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PCDHGA12O60330 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGA12O60330 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA12O60330 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PCDHGA12O60330 KRT18P41-201ENST00000518924 1277 ntBASIC17.89■□□□□ 0.45
PCDHGA12O60330 AC008687.5-201ENST00000593746 558 ntBASIC17.89■□□□□ 0.45
PCDHGA12O60330 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGA12O60330 AC139530.3-201ENST00000620344 690 ntBASIC17.89■□□□□ 0.45
PCDHGA12O60330 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA12O60330 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PCDHGA12O60330 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA12O60330 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGA12O60330 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PCDHGA12O60330 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA12O60330 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
PCDHGA12O60330 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PCDHGA12O60330 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA12O60330 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA12O60330 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGA12O60330 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA12O60330 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA12O60330 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGA12O60330 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA12O60330 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA12O60330 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA12O60330 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA12O60330 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGA12O60330 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGA12O60330 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHGA12O60330 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.88■□□□□ 0.45
PCDHGA12O60330 AC093909.1-201ENST00000504731 1122 ntBASIC17.88■□□□□ 0.45
PCDHGA12O60330 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHGA12O60330 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHGA12O60330 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGA12O60330 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.88■□□□□ 0.45
PCDHGA12O60330 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCDHGA12O60330 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA12O60330 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA12O60330 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA12O60330 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA12O60330 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA12O60330 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA12O60330 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA12O60330 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA12O60330 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms