Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH7O60245 LTB4R2-202ENST00000528054 3092 ntBASIC17.28■□□□□ 0.36
PCDH7O60245 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH7O60245 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH7O60245 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDH7O60245 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDH7O60245 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH7O60245 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
PCDH7O60245 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDH7O60245 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH7O60245 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDH7O60245 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH7O60245 AC034232.1-201ENST00000506026 1064 ntBASIC17.28■□□□□ 0.36
PCDH7O60245 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDH7O60245 AC010203.1-204ENST00000548782 407 ntBASIC17.28■□□□□ 0.36
PCDH7O60245 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDH7O60245 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDH7O60245 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH7O60245 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PCDH7O60245 AC133561.5-201ENST00000635547 218 ntBASIC17.28■□□□□ 0.36
PCDH7O60245 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH7O60245 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDH7O60245 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDH7O60245 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH7O60245 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH7O60245 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH7O60245 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH7O60245 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDH7O60245 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH7O60245 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDH7O60245 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH7O60245 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH7O60245 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH7O60245 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH7O60245 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH7O60245 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH7O60245 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH7O60245 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDH7O60245 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDH7O60245 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDH7O60245 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDH7O60245 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDH7O60245 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.27■□□□□ 0.36
PCDH7O60245 AC073912.3-201ENST00000624414 853 ntBASIC17.27■□□□□ 0.36
PCDH7O60245 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH7O60245 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH7O60245 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PCDH7O60245 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
PCDH7O60245 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.27■□□□□ 0.35
PCDH7O60245 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH7O60245 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH7O60245 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH7O60245 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH7O60245 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH7O60245 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH7O60245 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDH7O60245 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDH7O60245 AC132938.6-201ENST00000623828 1655 ntBASIC17.26■□□□□ 0.35
PCDH7O60245 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH7O60245 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDH7O60245 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH7O60245 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH7O60245 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH7O60245 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH7O60245 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH7O60245 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PCDH7O60245 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCDH7O60245 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH7O60245 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH7O60245 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDH7O60245 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PCDH7O60245 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDH7O60245 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDH7O60245 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDH7O60245 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDH7O60245 AC140113.3-201ENST00000605663 199 ntBASIC17.26■□□□□ 0.35
PCDH7O60245 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH7O60245 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDH7O60245 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH7O60245 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH7O60245 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDH7O60245 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
PCDH7O60245 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH7O60245 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH7O60245 KRT18P55-202ENST00000578578 1546 ntBASIC17.26■□□□□ 0.35
PCDH7O60245 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH7O60245 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH7O60245 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDH7O60245 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH7O60245 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH7O60245 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH7O60245 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH7O60245 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
PCDH7O60245 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH7O60245 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PCDH7O60245 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH7O60245 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH7O60245 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH7O60245 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH7O60245 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms