Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 LINC02199-201ENST00000506655 2702 ntBASIC15.42■□□□□ 0.06
SSNA1O43805 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SSNA1O43805 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.42■□□□□ 0.06
SSNA1O43805 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSNA1O43805 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.42■□□□□ 0.06
SSNA1O43805 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SSNA1O43805 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSNA1O43805 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.42■□□□□ 0.06
SSNA1O43805 AC007322.4-201ENST00000509611 723 ntBASIC15.42■□□□□ 0.06
SSNA1O43805 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15.42■□□□□ 0.06
SSNA1O43805 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC15.42■□□□□ 0.06
SSNA1O43805 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.42■□□□□ 0.06
SSNA1O43805 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SSNA1O43805 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSNA1O43805 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SSNA1O43805 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSNA1O43805 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSNA1O43805 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.42■□□□□ 0.06
SSNA1O43805 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SSNA1O43805 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.42■□□□□ 0.06
SSNA1O43805 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSNA1O43805 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.42■□□□□ 0.06
SSNA1O43805 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SSNA1O43805 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSNA1O43805 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSNA1O43805 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSNA1O43805 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSNA1O43805 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SSNA1O43805 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SSNA1O43805 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SSNA1O43805 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSNA1O43805 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSNA1O43805 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSNA1O43805 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SSNA1O43805 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SSNA1O43805 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SSNA1O43805 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSNA1O43805 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SSNA1O43805 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSNA1O43805 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SSNA1O43805 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SSNA1O43805 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSNA1O43805 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.41■□□□□ 0.06
SSNA1O43805 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.41■□□□□ 0.06
SSNA1O43805 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.41■□□□□ 0.06
SSNA1O43805 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSNA1O43805 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.41■□□□□ 0.06
SSNA1O43805 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSNA1O43805 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.41■□□□□ 0.06
SSNA1O43805 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SSNA1O43805 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SSNA1O43805 TSPY23P-201ENST00000440136 739 ntBASIC15.41■□□□□ 0.06
SSNA1O43805 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SSNA1O43805 AC013268.1-206ENST00000638368 961 ntBASIC15.41■□□□□ 0.06
SSNA1O43805 AC112229.1-201ENST00000639295 961 ntBASIC15.41■□□□□ 0.06
SSNA1O43805 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SSNA1O43805 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SSNA1O43805 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.41■□□□□ 0.06
SSNA1O43805 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SSNA1O43805 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSNA1O43805 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.41■□□□□ 0.06
SSNA1O43805 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSNA1O43805 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSNA1O43805 AL356309.3-201ENST00000624132 1934 ntBASIC15.41■□□□□ 0.06
SSNA1O43805 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSNA1O43805 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SSNA1O43805 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSNA1O43805 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SSNA1O43805 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SSNA1O43805 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SSNA1O43805 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
SSNA1O43805 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
SSNA1O43805 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.4■□□□□ 0.06
SSNA1O43805 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SSNA1O43805 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SSNA1O43805 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SSNA1O43805 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.4■□□□□ 0.06
SSNA1O43805 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 AC027612.3-201ENST00000413684 1047 ntBASIC15.4■□□□□ 0.06
SSNA1O43805 AL355472.2-201ENST00000422958 438 ntBASIC15.4■□□□□ 0.06
SSNA1O43805 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.4■□□□□ 0.06
SSNA1O43805 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SSNA1O43805 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.4■□□□□ 0.06
SSNA1O43805 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SSNA1O43805 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SSNA1O43805 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SSNA1O43805 AL357033.4-201ENST00000617703 1807 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms