Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
RIPK2O43353 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RIPK2O43353 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RIPK2O43353 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.35■□□□□ 0.53
RIPK2O43353 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.35■□□□□ 0.53
RIPK2O43353 LINC00304-203ENST00000565008 1864 ntBASIC18.35■□□□□ 0.53
RIPK2O43353 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RIPK2O43353 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.35■□□□□ 0.53
RIPK2O43353 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RIPK2O43353 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RIPK2O43353 ESRRAP1-201ENST00000400596 1257 ntBASIC18.35■□□□□ 0.53
RIPK2O43353 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RIPK2O43353 MFAP1P1-201ENST00000442257 1255 ntBASIC18.35■□□□□ 0.53
RIPK2O43353 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.35■□□□□ 0.53
RIPK2O43353 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RIPK2O43353 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.35■□□□□ 0.53
RIPK2O43353 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.35■□□□□ 0.53
RIPK2O43353 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.35■□□□□ 0.53
RIPK2O43353 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RIPK2O43353 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RIPK2O43353 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RIPK2O43353 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RIPK2O43353 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RIPK2O43353 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RIPK2O43353 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RIPK2O43353 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RIPK2O43353 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
RIPK2O43353 AC132938.6-201ENST00000623828 1655 ntBASIC18.34■□□□□ 0.53
RIPK2O43353 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
RIPK2O43353 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.34■□□□□ 0.53
RIPK2O43353 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RIPK2O43353 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RIPK2O43353 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.34■□□□□ 0.53
RIPK2O43353 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
RIPK2O43353 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RIPK2O43353 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.34■□□□□ 0.53
RIPK2O43353 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RIPK2O43353 KRT8P7-201ENST00000533003 1432 ntBASIC18.34■□□□□ 0.53
RIPK2O43353 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RIPK2O43353 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RIPK2O43353 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.34■□□□□ 0.53
RIPK2O43353 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
RIPK2O43353 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RIPK2O43353 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RIPK2O43353 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RIPK2O43353 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RIPK2O43353 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RIPK2O43353 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RIPK2O43353 KRT18P23-201ENST00000435622 1283 ntBASIC18.34■□□□□ 0.53
RIPK2O43353 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RIPK2O43353 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.34■□□□□ 0.53
RIPK2O43353 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.34■□□□□ 0.53
RIPK2O43353 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RIPK2O43353 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.34■□□□□ 0.53
RIPK2O43353 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RIPK2O43353 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.34■□□□□ 0.53
RIPK2O43353 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
RIPK2O43353 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RIPK2O43353 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RIPK2O43353 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RIPK2O43353 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RIPK2O43353 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RIPK2O43353 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RIPK2O43353 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RIPK2O43353 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RIPK2O43353 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RIPK2O43353 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
RIPK2O43353 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RIPK2O43353 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RIPK2O43353 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RIPK2O43353 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.33■□□□□ 0.53
RIPK2O43353 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RIPK2O43353 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RIPK2O43353 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RIPK2O43353 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.33■□□□□ 0.52
RIPK2O43353 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RIPK2O43353 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.33■□□□□ 0.52
RIPK2O43353 CA15P1-201ENST00000481698 905 ntBASIC18.33■□□□□ 0.52
RIPK2O43353 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RIPK2O43353 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RIPK2O43353 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.33■□□□□ 0.52
RIPK2O43353 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
RIPK2O43353 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RIPK2O43353 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.33■□□□□ 0.52
RIPK2O43353 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RIPK2O43353 AC073648.6-201ENST00000641589 218 ntBASIC18.33■□□□□ 0.52
RIPK2O43353 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RIPK2O43353 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.33■□□□□ 0.52
RIPK2O43353 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.33■□□□□ 0.52
RIPK2O43353 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RIPK2O43353 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RIPK2O43353 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RIPK2O43353 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RIPK2O43353 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RIPK2O43353 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RIPK2O43353 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RIPK2O43353 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RIPK2O43353 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.33■□□□□ 0.52
RIPK2O43353 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RIPK2O43353 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms