Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.87■□□□□ 0.61
TRANK1O15050 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.87■□□□□ 0.61
TRANK1O15050 AC010507.1-201ENST00000633895 436 ntBASIC18.87■□□□□ 0.61
TRANK1O15050 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRANK1O15050 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.87■□□□□ 0.61
TRANK1O15050 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRANK1O15050 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRANK1O15050 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRANK1O15050 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRANK1O15050 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.87■□□□□ 0.61
TRANK1O15050 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRANK1O15050 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRANK1O15050 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TRANK1O15050 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.87■□□□□ 0.61
TRANK1O15050 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.87■□□□□ 0.61
TRANK1O15050 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRANK1O15050 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.87■□□□□ 0.61
TRANK1O15050 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRANK1O15050 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRANK1O15050 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRANK1O15050 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRANK1O15050 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRANK1O15050 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.87■□□□□ 0.61
TRANK1O15050 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRANK1O15050 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.87■□□□□ 0.61
TRANK1O15050 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRANK1O15050 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.87■□□□□ 0.61
TRANK1O15050 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.87■□□□□ 0.61
TRANK1O15050 AC091812.2-201ENST00000619081 385 ntBASIC18.87■□□□□ 0.61
TRANK1O15050 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.87■□□□□ 0.61
TRANK1O15050 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.87■□□□□ 0.61
TRANK1O15050 AL022326.1-202ENST00000641533 845 ntBASIC18.87■□□□□ 0.61
TRANK1O15050 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRANK1O15050 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.86■□□□□ 0.61
TRANK1O15050 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.86■□□□□ 0.61
TRANK1O15050 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRANK1O15050 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRANK1O15050 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRANK1O15050 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRANK1O15050 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRANK1O15050 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.86■□□□□ 0.61
TRANK1O15050 LINC01126-201ENST00000623515 1646 ntBASIC18.86■□□□□ 0.61
TRANK1O15050 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TRANK1O15050 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRANK1O15050 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRANK1O15050 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.86■□□□□ 0.61
TRANK1O15050 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.86■□□□□ 0.61
TRANK1O15050 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRANK1O15050 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRANK1O15050 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRANK1O15050 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRANK1O15050 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRANK1O15050 KRT8P47-201ENST00000604727 1398 ntBASIC18.86■□□□□ 0.61
TRANK1O15050 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TRANK1O15050 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.86■□□□□ 0.61
TRANK1O15050 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TRANK1O15050 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRANK1O15050 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRANK1O15050 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRANK1O15050 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRANK1O15050 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRANK1O15050 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.86■□□□□ 0.61
TRANK1O15050 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.86■□□□□ 0.61
TRANK1O15050 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRANK1O15050 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.86■□□□□ 0.61
TRANK1O15050 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.86■□□□□ 0.61
TRANK1O15050 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.86■□□□□ 0.61
TRANK1O15050 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRANK1O15050 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TRANK1O15050 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
TRANK1O15050 AC004877.2-201ENST00000623941 599 ntBASIC18.85■□□□□ 0.61
TRANK1O15050 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRANK1O15050 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRANK1O15050 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRANK1O15050 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.85■□□□□ 0.61
TRANK1O15050 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRANK1O15050 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.85■□□□□ 0.61
TRANK1O15050 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.85■□□□□ 0.61
TRANK1O15050 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.85■□□□□ 0.61
TRANK1O15050 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.85■□□□□ 0.61
TRANK1O15050 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRANK1O15050 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.85■□□□□ 0.61
TRANK1O15050 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRANK1O15050 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.84■□□□□ 0.61
TRANK1O15050 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.84■□□□□ 0.61
TRANK1O15050 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.84■□□□□ 0.61
TRANK1O15050 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRANK1O15050 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.84■□□□□ 0.61
TRANK1O15050 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRANK1O15050 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRANK1O15050 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRANK1O15050 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRANK1O15050 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRANK1O15050 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRANK1O15050 AC132938.5-201ENST00000624980 1813 ntBASIC18.84■□□□□ 0.61
TRANK1O15050 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRANK1O15050 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
TRANK1O15050 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRANK1O15050 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRANK1O15050 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms