Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBFD1O14562 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.54■□□□□ 0.4
UBFD1O14562 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.54■□□□□ 0.4
UBFD1O14562 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBFD1O14562 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
UBFD1O14562 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBFD1O14562 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
UBFD1O14562 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.54■□□□□ 0.4
UBFD1O14562 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.54■□□□□ 0.4
UBFD1O14562 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBFD1O14562 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBFD1O14562 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBFD1O14562 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBFD1O14562 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBFD1O14562 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBFD1O14562 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
UBFD1O14562 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBFD1O14562 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
UBFD1O14562 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.54■□□□□ 0.4
UBFD1O14562 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBFD1O14562 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBFD1O14562 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBFD1O14562 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBFD1O14562 PRORSD1P-202ENST00000563365 2154 ntBASIC17.53■□□□□ 0.4
UBFD1O14562 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBFD1O14562 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
UBFD1O14562 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBFD1O14562 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBFD1O14562 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBFD1O14562 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
UBFD1O14562 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
UBFD1O14562 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
UBFD1O14562 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.53■□□□□ 0.4
UBFD1O14562 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBFD1O14562 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBFD1O14562 FAM87A-204ENST00000613235 858 ntBASIC17.53■□□□□ 0.4
UBFD1O14562 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.53■□□□□ 0.4
UBFD1O14562 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.53■□□□□ 0.4
UBFD1O14562 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBFD1O14562 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBFD1O14562 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBFD1O14562 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBFD1O14562 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBFD1O14562 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
UBFD1O14562 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBFD1O14562 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBFD1O14562 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.53■□□□□ 0.4
UBFD1O14562 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
UBFD1O14562 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
UBFD1O14562 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBFD1O14562 KRT17P2-201ENST00000300992 1314 ntBASIC17.52■□□□□ 0.4
UBFD1O14562 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
UBFD1O14562 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.52■□□□□ 0.4
UBFD1O14562 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBFD1O14562 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBFD1O14562 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBFD1O14562 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.52■□□□□ 0.4
UBFD1O14562 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
UBFD1O14562 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBFD1O14562 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBFD1O14562 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBFD1O14562 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
UBFD1O14562 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBFD1O14562 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBFD1O14562 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.52■□□□□ 0.4
UBFD1O14562 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.52■□□□□ 0.4
UBFD1O14562 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.52■□□□□ 0.4
UBFD1O14562 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBFD1O14562 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBFD1O14562 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.52■□□□□ 0.4
UBFD1O14562 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBFD1O14562 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
UBFD1O14562 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBFD1O14562 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBFD1O14562 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBFD1O14562 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBFD1O14562 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBFD1O14562 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
UBFD1O14562 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBFD1O14562 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.52■□□□□ 0.39
UBFD1O14562 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.52■□□□□ 0.39
UBFD1O14562 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.52■□□□□ 0.39
UBFD1O14562 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
UBFD1O14562 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBFD1O14562 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBFD1O14562 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
UBFD1O14562 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
UBFD1O14562 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBFD1O14562 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBFD1O14562 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
UBFD1O14562 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.51■□□□□ 0.39
UBFD1O14562 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBFD1O14562 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBFD1O14562 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBFD1O14562 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBFD1O14562 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBFD1O14562 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.51■□□□□ 0.39
UBFD1O14562 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.51■□□□□ 0.39
UBFD1O14562 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.51■□□□□ 0.39
UBFD1O14562 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms