Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
EIF3FO00303 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.68■□□□□ 0.42
EIF3FO00303 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EIF3FO00303 IGHGP-201ENST00000390555 1178 ntBASIC17.68■□□□□ 0.42
EIF3FO00303 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EIF3FO00303 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.68■□□□□ 0.42
EIF3FO00303 DUX4L26-201ENST00000489078 1255 ntBASIC17.68■□□□□ 0.42
EIF3FO00303 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.68■□□□□ 0.42
EIF3FO00303 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.68■□□□□ 0.42
EIF3FO00303 ZNF444P1-201ENST00000559497 298 ntBASIC17.68■□□□□ 0.42
EIF3FO00303 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.68■□□□□ 0.42
EIF3FO00303 AC009154.2-201ENST00000621177 724 ntBASIC17.68■□□□□ 0.42
EIF3FO00303 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.68■□□□□ 0.42
EIF3FO00303 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EIF3FO00303 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
EIF3FO00303 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
EIF3FO00303 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
EIF3FO00303 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
EIF3FO00303 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
EIF3FO00303 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
EIF3FO00303 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EIF3FO00303 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
EIF3FO00303 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EIF3FO00303 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
EIF3FO00303 GNAS-203ENST00000306120 1878 ntBASIC17.67■□□□□ 0.42
EIF3FO00303 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EIF3FO00303 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EIF3FO00303 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EIF3FO00303 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EIF3FO00303 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.67■□□□□ 0.42
EIF3FO00303 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EIF3FO00303 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.67■□□□□ 0.42
EIF3FO00303 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.67■□□□□ 0.42
EIF3FO00303 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EIF3FO00303 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EIF3FO00303 TMPOP1-202ENST00000424642 1267 ntBASIC17.67■□□□□ 0.42
EIF3FO00303 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.67■□□□□ 0.42
EIF3FO00303 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EIF3FO00303 AP003733.1-201ENST00000491725 852 ntBASIC17.67■□□□□ 0.42
EIF3FO00303 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.67■□□□□ 0.42
EIF3FO00303 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.67■□□□□ 0.42
EIF3FO00303 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
EIF3FO00303 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.67■□□□□ 0.42
EIF3FO00303 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
EIF3FO00303 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EIF3FO00303 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EIF3FO00303 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EIF3FO00303 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
EIF3FO00303 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
EIF3FO00303 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EIF3FO00303 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
EIF3FO00303 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EIF3FO00303 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
EIF3FO00303 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.66■□□□□ 0.42
EIF3FO00303 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
EIF3FO00303 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EIF3FO00303 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EIF3FO00303 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
EIF3FO00303 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
EIF3FO00303 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
EIF3FO00303 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
EIF3FO00303 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.66■□□□□ 0.42
EIF3FO00303 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
EIF3FO00303 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EIF3FO00303 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.66■□□□□ 0.42
EIF3FO00303 LINC01311-201ENST00000565162 1445 ntBASIC17.66■□□□□ 0.42
EIF3FO00303 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EIF3FO00303 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EIF3FO00303 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EIF3FO00303 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
EIF3FO00303 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EIF3FO00303 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.66■□□□□ 0.42
EIF3FO00303 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.66■□□□□ 0.42
EIF3FO00303 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.66■□□□□ 0.42
EIF3FO00303 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.66■□□□□ 0.42
EIF3FO00303 GPR32P1-201ENST00000601788 811 ntBASIC17.66■□□□□ 0.42
EIF3FO00303 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
EIF3FO00303 AC068880.1-201ENST00000507289 2297 ntBASIC17.66■□□□□ 0.42
EIF3FO00303 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EIF3FO00303 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EIF3FO00303 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
EIF3FO00303 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
EIF3FO00303 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
EIF3FO00303 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
EIF3FO00303 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EIF3FO00303 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.66■□□□□ 0.42
EIF3FO00303 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.66■□□□□ 0.42
EIF3FO00303 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EIF3FO00303 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.66■□□□□ 0.42
EIF3FO00303 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EIF3FO00303 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.66■□□□□ 0.42
EIF3FO00303 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.66■□□□□ 0.42
EIF3FO00303 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EIF3FO00303 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EIF3FO00303 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EIF3FO00303 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EIF3FO00303 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.65■□□□□ 0.42
EIF3FO00303 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EIF3FO00303 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.65■□□□□ 0.42
EIF3FO00303 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms