Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 LINC01126-201ENST00000623515 1646 ntBASIC16.74■□□□□ 0.27
TNFRSF11BO00300 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF11BO00300 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 MFAP1P1-201ENST00000442257 1255 ntBASIC16.73■□□□□ 0.27
TNFRSF11BO00300 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 SLC25A1P4-201ENST00000567977 778 ntBASIC16.73■□□□□ 0.27
TNFRSF11BO00300 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TNFRSF11BO00300 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 AL355312.1-201ENST00000407115 2176 ntBASIC16.72■□□□□ 0.27
TNFRSF11BO00300 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TNFRSF11BO00300 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 KRT18P6-201ENST00000555540 1265 ntBASIC16.71■□□□□ 0.27
TNFRSF11BO00300 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TNFRSF11BO00300 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TNFRSF11BO00300 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.71■□□□□ 0.26
TNFRSF11BO00300 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms