Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TLR4O00206 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
TLR4O00206 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.88■□□□□ 0.45
TLR4O00206 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 RCN1P2-201ENST00000398357 915 ntBASIC17.88■□□□□ 0.45
TLR4O00206 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.88■□□□□ 0.45
TLR4O00206 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.88■□□□□ 0.45
TLR4O00206 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 AC009154.2-201ENST00000621177 724 ntBASIC17.88■□□□□ 0.45
TLR4O00206 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TLR4O00206 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 TP73-AS1-210ENST00000637775 1455 ntBASIC17.88■□□□□ 0.45
TLR4O00206 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.88■□□□□ 0.45
TLR4O00206 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TLR4O00206 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR4O00206 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR4O00206 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR4O00206 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR4O00206 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR4O00206 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.87■□□□□ 0.45
TLR4O00206 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR4O00206 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.87■□□□□ 0.45
TLR4O00206 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
TLR4O00206 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR4O00206 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR4O00206 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR4O00206 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.87■□□□□ 0.45
TLR4O00206 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.87■□□□□ 0.45
TLR4O00206 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TLR4O00206 AF186996.4-201ENST00000467186 377 ntBASIC17.87■□□□□ 0.45
TLR4O00206 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.87■□□□□ 0.45
TLR4O00206 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.87■□□□□ 0.45
TLR4O00206 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.87■□□□□ 0.45
TLR4O00206 AC005336.2-201ENST00000593183 939 ntBASIC17.87■□□□□ 0.45
TLR4O00206 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TLR4O00206 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TLR4O00206 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR4O00206 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TLR4O00206 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TLR4O00206 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TLR4O00206 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR4O00206 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR4O00206 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.87■□□□□ 0.45
TLR4O00206 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR4O00206 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TLR4O00206 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR4O00206 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR4O00206 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TLR4O00206 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
TLR4O00206 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.86■□□□□ 0.45
TLR4O00206 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TLR4O00206 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TLR4O00206 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TLR4O00206 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TLR4O00206 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.86■□□□□ 0.45
TLR4O00206 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TLR4O00206 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TLR4O00206 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TLR4O00206 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TLR4O00206 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TLR4O00206 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.86■□□□□ 0.45
TLR4O00206 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.86■□□□□ 0.45
TLR4O00206 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.86■□□□□ 0.45
TLR4O00206 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.86■□□□□ 0.45
TLR4O00206 KRT18P67-201ENST00000432816 1264 ntBASIC17.86■□□□□ 0.45
TLR4O00206 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TLR4O00206 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.86■□□□□ 0.45
TLR4O00206 RNA5SP419-201ENST00000515908 135 ntBASIC17.86■□□□□ 0.45
TLR4O00206 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TLR4O00206 AC008608.2-201ENST00000606089 416 ntBASIC17.86■□□□□ 0.45
TLR4O00206 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TLR4O00206 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TLR4O00206 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TLR4O00206 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.86■□□□□ 0.45
TLR4O00206 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TLR4O00206 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
TLR4O00206 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TLR4O00206 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TLR4O00206 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.86■□□□□ 0.45
TLR4O00206 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.86■□□□□ 0.45
TLR4O00206 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TLR4O00206 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TLR4O00206 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TLR4O00206 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TLR4O00206 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms