Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
USP17L11C9JVI0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.9■□□□□ 0.94
USP17L11C9JVI0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
USP17L11C9JVI0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.9■□□□□ 0.94
USP17L11C9JVI0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
USP17L11C9JVI0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
USP17L11C9JVI0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP17L11C9JVI0 AP005117.1-201ENST00000584346 1413 ntBASIC20.9■□□□□ 0.94
USP17L11C9JVI0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP17L11C9JVI0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP17L11C9JVI0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
USP17L11C9JVI0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP17L11C9JVI0 HNRNPDP1-201ENST00000439535 754 ntBASIC20.9■□□□□ 0.94
USP17L11C9JVI0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.9■□□□□ 0.94
USP17L11C9JVI0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP17L11C9JVI0 KRT18P58-201ENST00000527480 1120 ntBASIC20.9■□□□□ 0.94
USP17L11C9JVI0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP17L11C9JVI0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.9■□□□□ 0.94
USP17L11C9JVI0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.9■□□□□ 0.94
USP17L11C9JVI0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP17L11C9JVI0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
USP17L11C9JVI0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP17L11C9JVI0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
USP17L11C9JVI0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP17L11C9JVI0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.89■□□□□ 0.94
USP17L11C9JVI0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
USP17L11C9JVI0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP17L11C9JVI0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.94
USP17L11C9JVI0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP17L11C9JVI0 RPS2P28-201ENST00000314255 741 ntBASIC20.89■□□□□ 0.93
USP17L11C9JVI0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.89■□□□□ 0.93
USP17L11C9JVI0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.89■□□□□ 0.93
USP17L11C9JVI0 ABCD1P5-201ENST00000445663 754 ntBASIC20.89■□□□□ 0.93
USP17L11C9JVI0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.89■□□□□ 0.93
USP17L11C9JVI0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.89■□□□□ 0.93
USP17L11C9JVI0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.89■□□□□ 0.93
USP17L11C9JVI0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.89■□□□□ 0.93
USP17L11C9JVI0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.89■□□□□ 0.93
USP17L11C9JVI0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
USP17L11C9JVI0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP17L11C9JVI0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
USP17L11C9JVI0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP17L11C9JVI0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP17L11C9JVI0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP17L11C9JVI0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.88■□□□□ 0.93
USP17L11C9JVI0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP17L11C9JVI0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP17L11C9JVI0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP17L11C9JVI0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP17L11C9JVI0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.88■□□□□ 0.93
USP17L11C9JVI0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP17L11C9JVI0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
USP17L11C9JVI0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.88■□□□□ 0.93
USP17L11C9JVI0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP17L11C9JVI0 RPL13AP23-201ENST00000480739 586 ntBASIC20.88■□□□□ 0.93
USP17L11C9JVI0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.88■□□□□ 0.93
USP17L11C9JVI0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.88■□□□□ 0.93
USP17L11C9JVI0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
USP17L11C9JVI0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
USP17L11C9JVI0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
USP17L11C9JVI0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP17L11C9JVI0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.88■□□□□ 0.93
USP17L11C9JVI0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP17L11C9JVI0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.88■□□□□ 0.93
USP17L11C9JVI0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP17L11C9JVI0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 AC112698.1-201ENST00000510299 916 ntBASIC20.87■□□□□ 0.93
USP17L11C9JVI0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 AC073592.3-201ENST00000625118 1834 ntBASIC20.87■□□□□ 0.93
USP17L11C9JVI0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP17L11C9JVI0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP17L11C9JVI0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.86■□□□□ 0.93
USP17L11C9JVI0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms