Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 TPSP2-201ENST00000561760 610 ntBASIC14.25□□□□□ -0.13
LINC01548A6NM66 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 AC092329.2-201ENST00000598402 547 ntBASIC14.25□□□□□ -0.13
LINC01548A6NM66 AL592071.1-201ENST00000611956 408 ntBASIC14.25□□□□□ -0.13
LINC01548A6NM66 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LINC01548A6NM66 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01548A6NM66 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01548A6NM66 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC01548A6NM66 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01548A6NM66 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01548A6NM66 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
LINC01548A6NM66 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01548A6NM66 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01548A6NM66 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LINC01548A6NM66 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LINC01548A6NM66 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01548A6NM66 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LINC01548A6NM66 AP000997.3-201ENST00000623333 2250 ntBASIC14.24□□□□□ -0.13
LINC01548A6NM66 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01548A6NM66 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01548A6NM66 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LINC01548A6NM66 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01548A6NM66 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.24□□□□□ -0.13
LINC01548A6NM66 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC01548A6NM66 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01548A6NM66 AL845331.1-201ENST00000424978 1190 ntBASIC14.24□□□□□ -0.13
LINC01548A6NM66 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01548A6NM66 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01548A6NM66 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01548A6NM66 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01548A6NM66 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01548A6NM66 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01548A6NM66 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01548A6NM66 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC01548A6NM66 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01548A6NM66 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
LINC01548A6NM66 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
LINC01548A6NM66 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01548A6NM66 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC01548A6NM66 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
LINC01548A6NM66 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01548A6NM66 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LINC01548A6NM66 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LINC01548A6NM66 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC01548A6NM66 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC01548A6NM66 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC01548A6NM66 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 LINC00265-3P-201ENST00000447588 903 ntBASIC14.23□□□□□ -0.13
LINC01548A6NM66 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC01548A6NM66 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC01548A6NM66 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LINC01548A6NM66 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC01548A6NM66 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
LINC01548A6NM66 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.23□□□□□ -0.13
LINC01548A6NM66 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LINC01548A6NM66 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC01548A6NM66 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC01548A6NM66 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 ABALON-201ENST00000629058 1903 ntBASIC14.23□□□□□ -0.13
LINC01548A6NM66 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01548A6NM66 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms