Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
LCHNA4D1U4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCHNA4D1U4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LCHNA4D1U4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.3■□□□□ 0.68
LCHNA4D1U4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCHNA4D1U4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LCHNA4D1U4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LCHNA4D1U4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LCHNA4D1U4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LCHNA4D1U4 KRT18P27-201ENST00000427733 1299 ntBASIC19.3■□□□□ 0.68
LCHNA4D1U4 KRT18P65-201ENST00000439811 1286 ntBASIC19.3■□□□□ 0.68
LCHNA4D1U4 CYMP-203ENST00000474680 1263 ntBASIC19.3■□□□□ 0.68
LCHNA4D1U4 AC112698.1-201ENST00000510299 916 ntBASIC19.3■□□□□ 0.68
LCHNA4D1U4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.3■□□□□ 0.68
LCHNA4D1U4 RFPL4AP1-201ENST00000530883 850 ntBASIC19.3■□□□□ 0.68
LCHNA4D1U4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LCHNA4D1U4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.3■□□□□ 0.68
LCHNA4D1U4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.3■□□□□ 0.68
LCHNA4D1U4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.3■□□□□ 0.68
LCHNA4D1U4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCHNA4D1U4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCHNA4D1U4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LCHNA4D1U4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCHNA4D1U4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.3■□□□□ 0.68
LCHNA4D1U4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCHNA4D1U4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
LCHNA4D1U4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCHNA4D1U4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.3■□□□□ 0.68
LCHNA4D1U4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
LCHNA4D1U4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCHNA4D1U4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCHNA4D1U4 AC004817.3-201ENST00000602957 2129 ntBASIC19.3■□□□□ 0.68
LCHNA4D1U4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCHNA4D1U4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCHNA4D1U4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LCHNA4D1U4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCHNA4D1U4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCHNA4D1U4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCHNA4D1U4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LCHNA4D1U4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LCHNA4D1U4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.29■□□□□ 0.68
LCHNA4D1U4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.29■□□□□ 0.68
LCHNA4D1U4 ALG1L5P-201ENST00000482043 771 ntBASIC19.29■□□□□ 0.68
LCHNA4D1U4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.29■□□□□ 0.68
LCHNA4D1U4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
LCHNA4D1U4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.29■□□□□ 0.68
LCHNA4D1U4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.29■□□□□ 0.68
LCHNA4D1U4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCHNA4D1U4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LCHNA4D1U4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.29■□□□□ 0.68
LCHNA4D1U4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCHNA4D1U4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LCHNA4D1U4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
LCHNA4D1U4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.29■□□□□ 0.68
LCHNA4D1U4 BX323043.1-201ENST00000641006 1765 ntBASIC19.29■□□□□ 0.68
LCHNA4D1U4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.29■□□□□ 0.68
LCHNA4D1U4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.28■□□□□ 0.68
LCHNA4D1U4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.28■□□□□ 0.68
LCHNA4D1U4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCHNA4D1U4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.28■□□□□ 0.68
LCHNA4D1U4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.28■□□□□ 0.68
LCHNA4D1U4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCHNA4D1U4 AC073621.1-201ENST00000392730 636 ntBASIC19.28■□□□□ 0.68
LCHNA4D1U4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.28■□□□□ 0.68
LCHNA4D1U4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.28■□□□□ 0.68
LCHNA4D1U4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.28■□□□□ 0.68
LCHNA4D1U4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.28■□□□□ 0.68
LCHNA4D1U4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
LCHNA4D1U4 MIR3197-201ENST00000582241 73 ntBASIC19.28■□□□□ 0.68
LCHNA4D1U4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LCHNA4D1U4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.28■□□□□ 0.68
LCHNA4D1U4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LCHNA4D1U4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCHNA4D1U4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.28■□□□□ 0.68
LCHNA4D1U4 AL049812.1-201ENST00000432563 2267 ntBASIC19.28■□□□□ 0.68
LCHNA4D1U4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCHNA4D1U4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCHNA4D1U4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCHNA4D1U4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.27■□□□□ 0.68
LCHNA4D1U4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.27■□□□□ 0.68
LCHNA4D1U4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.27■□□□□ 0.68
LCHNA4D1U4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCHNA4D1U4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCHNA4D1U4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCHNA4D1U4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.27■□□□□ 0.68
LCHNA4D1U4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCHNA4D1U4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LCHNA4D1U4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.27■□□□□ 0.68
LCHNA4D1U4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.27■□□□□ 0.68
LCHNA4D1U4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCHNA4D1U4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
LCHNA4D1U4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
LCHNA4D1U4 AC108751.1-201ENST00000490852 363 ntBASIC19.27■□□□□ 0.68
LCHNA4D1U4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
LCHNA4D1U4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.27■□□□□ 0.68
LCHNA4D1U4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.27■□□□□ 0.68
LCHNA4D1U4 AL499627.1-201ENST00000569373 2188 ntBASIC19.27■□□□□ 0.68
LCHNA4D1U4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCHNA4D1U4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LCHNA4D1U4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms