Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 AL353807.1-201ENST00000427475 662 ntBASIC19.6■□□□□ 0.73
CCDC66A2RUB6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 TSPY20P-201ENST00000450910 630 ntBASIC19.6■□□□□ 0.73
CCDC66A2RUB6 AC026271.3-201ENST00000571884 352 ntBASIC19.6■□□□□ 0.73
CCDC66A2RUB6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.6■□□□□ 0.73
CCDC66A2RUB6 AC073648.6-201ENST00000641589 218 ntBASIC19.6■□□□□ 0.73
CCDC66A2RUB6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC66A2RUB6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 KRT16P1-201ENST00000399124 1418 ntBASIC19.59■□□□□ 0.73
CCDC66A2RUB6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC66A2RUB6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC66A2RUB6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC66A2RUB6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CCDC66A2RUB6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.58■□□□□ 0.73
CCDC66A2RUB6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC66A2RUB6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CCDC66A2RUB6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC66A2RUB6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC66A2RUB6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC66A2RUB6 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
CCDC66A2RUB6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC66A2RUB6 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CCDC66A2RUB6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
CCDC66A2RUB6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC66A2RUB6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC66A2RUB6 ABHD17AP1-201ENST00000358206 933 ntBASIC19.58■□□□□ 0.72
CCDC66A2RUB6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC66A2RUB6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC66A2RUB6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC66A2RUB6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC66A2RUB6 CKBP1-201ENST00000565489 1086 ntBASIC19.58■□□□□ 0.72
CCDC66A2RUB6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC66A2RUB6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.58■□□□□ 0.72
CCDC66A2RUB6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC66A2RUB6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CCDC66A2RUB6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CCDC66A2RUB6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CCDC66A2RUB6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
CCDC66A2RUB6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC66A2RUB6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC66A2RUB6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC66A2RUB6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC66A2RUB6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC66A2RUB6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CCDC66A2RUB6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC66A2RUB6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC66A2RUB6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms