Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.58■□□□□ 0.41
PCDHGA3Q9Y5H0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA3Q9Y5H0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA3Q9Y5H0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA3Q9Y5H0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA3Q9Y5H0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
PCDHGA3Q9Y5H0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA3Q9Y5H0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.58■□□□□ 0.41
PCDHGA3Q9Y5H0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 AL139384.1-201ENST00000612143 3047 ntBASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 AC104819.1-201ENST00000504587 486 ntBASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 AC006333.2-201ENST00000607957 2099 ntBASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA3Q9Y5H0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 AC090164.3-201ENST00000610780 2143 ntBASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 NOC2LP2-201ENST00000407594 1944 ntBASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 EMBP1-201ENST00000458200 901 ntBASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 KRT18P31-201ENST00000506277 1292 ntBASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 AC009065.1-201ENST00000564055 1225 ntBASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 GPR32P1-201ENST00000601788 811 ntBASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 AL732292.2-201ENST00000609649 430 ntBASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 IGHV3-41-201ENST00000613121 348 ntBASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA3Q9Y5H0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 FOSL1P1-201ENST00000511041 816 ntBASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 AL160237.2-201ENST00000556165 472 ntBASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 AC104692.2-201ENST00000603054 253 ntBASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 AL161938.1-201ENST00000569833 2180 ntBASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA3Q9Y5H0 IRX1P1-201ENST00000438849 1838 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms